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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 4
  • golgi 3
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:peroxisome, secretory
BaCelLo:secretory
MultiLoc:peroxisome
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
WoLF PSORT:extracellular
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400045877 Potato extracellular 29.97 85.98
KRG89485 Soybean extracellular 34.85 60.8
KRH50525 Soybean extracellular 33.88 56.83
Solyc01g010310.2.1 Tomato extracellular 33.22 53.97
KRH75030 Soybean extracellular 36.81 52.56
KRH70882 Soybean extracellular 37.13 52.53
Solyc05g012380.2.1 Tomato extracellular 34.53 52.48
VIT_01s0011g00570.t01 Wine grape extracellular 31.92 50.78
Bra026879.1-P Field mustard extracellular 21.82 47.18
AT2G03505.1 Thale cress extracellular 25.73 47.02
CDY65418 Canola cytosol 22.48 46.94
Bra026878.1-P Field mustard extracellular 21.17 46.1
GSMUA_Achr4P23440_001 Banana cytosol 22.48 46.0
Bra025116.1-P Field mustard extracellular 24.1 45.96
CDY02987 Canola extracellular 24.1 45.96
CDY16115 Canola extracellular 23.13 45.81
CDY51213 Canola extracellular 23.78 45.34
CDY16114 Canola extracellular 26.38 45.25
Solyc03g115200.2.1 Tomato extracellular 26.71 43.85
Bra016724.1-P Field mustard extracellular 24.43 43.6
CDX96880 Canola extracellular 24.43 43.6
CDY33795 Canola extracellular 25.41 43.58
Bra026880.1-P Field mustard extracellular 25.41 43.58
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 25.41 43.33
CDY34558 Canola extracellular 23.78 42.44
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 25.41 40.62
GSMUA_Achr7P26650_001 Banana extracellular 15.31 40.52
CDX98134 Canola extracellular 25.08 40.31
GSMUA_Achr5P08900_001 Banana extracellular 24.76 40.0
GSMUA_Achr9P07140_001 Banana extracellular 24.1 39.78
Bra019700.1-P Field mustard extracellular 25.41 39.59
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 24.43 39.27
CDY36415 Canola extracellular 24.76 38.78
EER97492 Sorghum extracellular 24.1 38.14
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 23.78 36.87
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 23.78 36.68
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 23.78 36.68
GSMUA_Achr8P28170_001 Banana extracellular 18.24 36.13
AT1G13830.2 Thale cress mitochondrion, peroxisome, plastid, vacuole 24.76 36.02
Os03t0756300-01 Rice extracellular 20.52 36.0
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 23.13 35.5
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 23.45 35.12
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 22.48 34.85
TraesCS5B01G398000.1 Wheat extracellular 18.57 34.76
TraesCS5A01G393200.1 Wheat extracellular 18.57 34.13
TraesCS5D01G403000.1 Wheat extracellular 18.24 33.73
Os07t0600700-01 Rice extracellular 21.17 33.51
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 20.2 32.98
TraesCS6B01G138700.1 Wheat endoplasmic reticulum, extracellular, vacuole 21.17 32.83
Solyc07g047710.2.1 Tomato extracellular 12.05 32.46
TraesCS5B01G399400.1 Wheat extracellular 16.61 32.28
TraesCS6D01G099100.1 Wheat endoplasmic reticulum, extracellular, vacuole 19.87 32.11
Solyc09g091920.2.1 Tomato endoplasmic reticulum, extracellular 20.52 31.98
Os01t0763900-01 Rice extracellular 21.5 31.88
Zm00001d047293_P001 Maize endoplasmic reticulum, extracellular, vacuole 20.2 31.63
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 20.2 31.47
TraesCS6A01G110400.1 Wheat endoplasmic reticulum, extracellular, vacuole 20.2 31.47
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 19.22 31.38
Solyc11g012580.1.1 Tomato extracellular 11.73 30.77
Zm00001d029539_P001 Maize endoplasmic reticulum, extracellular, vacuole 19.87 30.5
OQU87600 Sorghum extracellular 18.57 30.32
HORVU4Hr1G028360.1 Barley peroxisome, plastid 12.38 30.16
TraesCS3D01G299600.1 Wheat extracellular 19.22 30.1
TraesCS3A01G302400.1 Wheat extracellular 19.22 30.1
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 23.45 29.63
Solyc12g098410.1.1 Tomato endoplasmic reticulum, extracellular 18.57 28.79
Os05t0512600-01 Rice extracellular 20.52 27.63
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 18.89 27.49
Zm00001d010728_P005 Maize extracellular 19.54 27.4
TraesCS1B01G346200.2 Wheat endoplasmic reticulum, extracellular, vacuole 18.57 27.27
EES18492 Sorghum extracellular 20.2 27.07
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 21.5 27.05
TraesCS1A01G332500.1 Wheat extracellular 18.24 26.79
TraesCS1D01G335200.1 Wheat endoplasmic reticulum, extracellular, vacuole 18.89 26.73
Zm00001d013250_P003 Maize extracellular 19.22 26.34
KXG37528 Sorghum mitochondrion 22.48 26.04
HORVU2Hr1G033470.1 Barley cytosol, plastid 25.08 25.93
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 18.89 25.66
Zm00001d038682_P001 Maize extracellular 19.22 25.65
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 21.82 24.36
Solyc04g058080.2.1 Tomato extracellular 13.36 23.03
HORVU3Hr1G074010.3 Barley cytosol, plastid 21.5 22.68
TraesCS5A01G548300.1 Wheat plasma membrane 14.33 22.45
HORVU5Hr1G096090.6 Barley plastid 16.94 22.22
Solyc07g056310.2.1 Tomato extracellular 15.96 19.84
Solyc07g053430.2.1 Tomato endoplasmic reticulum, extracellular 14.01 19.11
Solyc02g071200.2.1 Tomato extracellular 18.24 18.48
Solyc05g016390.2.1 Tomato endoplasmic reticulum, extracellular 13.36 15.89
Solyc01g101120.2.1 Tomato endoplasmic reticulum, golgi 18.24 15.26
Solyc12g017360.1.1 Tomato cytosol, peroxisome, plastid 13.36 13.9
Protein Annotations
EnsemblPlants:Solyc04g005420.2.1EnsemblPlantsGene:Solyc04g005420.2GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0016020GO:GO:0016787GO:GO:0030246
GO:GO:0030247GO:GO:0046658InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF53PFAM:PF07983
SEG:segSMART:SM00768UniParc:UPI00027661D1UniProt:K4BNE8MapMan:35.1:
Description
No Description!
Coordinates
chr4:-:290581..296842
Molecular Weight (calculated)
32155.0 Da
IEP (calculated)
7.961
GRAVY (calculated)
-0.132
Length
307 amino acids
Sequence
(BLAST)
001: MNVQWTSSLP YFYVLREVLD NSESLHHLSP FTKVKVLGLP LCIFCRLGSK CNYQKKGSEV YDTSWGLHGP SRSSLPVNCN YRQMTTFLLF SLFFLAITNH
101: SSGLYCICKD GVSDQQLQKN IDYACGAGAD CTPITQNGPC YNPNTIKDHC NYAVNSYYQR KGAAGATCDF TGTATTSPNP PTTTNSGCVY QSSPSNTGGG
201: TTTPSTAPPG TTTPTIAPPG TTIAPPGTTT PTIAPPGSTI PTIAPPGTTT PGTGTGTGIV TTPGANNPPF GIGPSSVGID GNAAMHLQNT IFFTLALLAI
301: SFLCSRV
Best Arabidopsis Sequence Match ( AT1G18650.2 )
(BLAST)
001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASARY TPFFLSSLLI CCFANKNWLW S
Arabidopsis Description
PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.