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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
 extracellular: 19226311
plasma membrane: 19502382
msms PMID: 19502382 doi
M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto
Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.
msms PMID: 19226311 doi
WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim
Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G302400.1 Wheat extracellular 61.84 65.31
OQU87600 Sorghum extracellular 57.49 63.3
TraesCS3D01G299600.1 Wheat extracellular 59.9 63.27
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 55.07 60.64
KRH54678 Soybean extracellular, nucleus 29.47 54.95
Os05t0512600-01 Rice extracellular 52.17 47.37
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 42.51 46.81
GSMUA_Achr7P26650_001 Banana extracellular 25.6 45.69
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 60.39 45.45
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 42.03 45.31
Os07t0600700-01 Rice extracellular 42.03 44.85
HORVU3Hr1G074010.3 Barley cytosol, plastid 62.8 44.67
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 40.1 43.46
GSMUA_Achr9P07140_001 Banana extracellular 38.65 43.01
Os03t0756300-01 Rice extracellular 35.27 41.71
GSMUA_Achr8P28170_001 Banana extracellular 30.92 41.29
PGSC0003DMT400045877 Potato extracellular 21.26 41.12
GSMUA_Achr5P08900_001 Banana extracellular 37.2 40.53
Solyc03g115200.2.1 Tomato extracellular 36.23 40.11
PGSC0003DMT400063348 Potato extracellular 35.75 40.0
CDX96707 Canola extracellular 35.75 40.0
CDY51213 Canola extracellular 30.43 39.13
CDX83826 Canola extracellular 34.78 39.13
AT1G18650.1 Thale cress extracellular 34.78 39.13
Bra025116.1-P Field mustard extracellular 29.95 38.51
KRH03122 Soybean extracellular, nucleus 37.68 38.42
CDY26741 Canola extracellular 34.3 38.17
CDY02987 Canola extracellular 29.47 37.89
CDY19232 Canola extracellular 34.3 37.77
VIT_17s0000g07260.t01 Wine grape extracellular 37.68 37.68
CDY42854 Canola extracellular 35.27 37.44
CDY16114 Canola extracellular 32.37 37.43
Bra026879.1-P Field mustard extracellular 25.6 37.32
VIT_01s0011g00570.t01 Wine grape extracellular 34.78 37.31
Bra029334.1-P Field mustard extracellular 34.78 36.92
CDY33795 Canola extracellular 31.88 36.87
Bra026880.1-P Field mustard extracellular 31.88 36.87
CDY65418 Canola cytosol 26.09 36.73
CDY16822 Canola extracellular 35.27 36.68
KRG89485 Soybean extracellular 30.92 36.36
AT5G61130.1 Thale cress extracellular 35.27 36.32
Bra035941.1-P Field mustard extracellular 34.78 36.18
CDX87201 Canola extracellular 34.78 36.18
KRH50525 Soybean extracellular 31.88 36.07
KRH75030 Soybean extracellular 37.2 35.81
CDY23085 Canola extracellular, plasma membrane, vacuole 33.33 35.75
CDY02169 Canola extracellular 33.33 35.57
KRH70882 Soybean extracellular 36.72 35.02
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 41.06 34.98
CDY16115 Canola extracellular 26.09 34.84
AT2G03505.1 Thale cress extracellular 28.02 34.52
CDX69983 Canola extracellular 34.78 33.96
Bra009313.1-P Field mustard extracellular 34.78 33.96
PGSC0003DMT400072939 Potato extracellular 33.33 33.5
AT5G08000.2 Thale cress extracellular 34.3 33.33
Bra026878.1-P Field mustard extracellular 22.71 33.33
Bra016724.1-P Field mustard extracellular 27.54 33.14
CDX96880 Canola extracellular 27.54 33.14
KRH56823 Soybean extracellular 33.82 32.86
Solyc05g012380.2.1 Tomato extracellular 31.88 32.67
CDY34558 Canola extracellular 27.05 32.56
Os06t0537700-01 Rice extracellular 28.99 32.26
PGSC0003DMT400003054 Potato extracellular 29.47 31.94
CDY07353 Canola extracellular 32.85 31.19
Bra004003.1-P Field mustard extracellular 32.85 31.19
Bra012981.1-P Field mustard extracellular, vacuole 33.33 31.08
CDY04273 Canola extracellular 32.37 30.73
Solyc01g010310.2.1 Tomato extracellular 28.02 30.69
CDX99038 Canola extracellular 34.3 30.21
AT1G69295.1 Thale cress extracellular 31.4 29.28
CDY54140 Canola extracellular 29.47 29.19
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 27.54 29.08
Bra012458.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 27.54 29.08
CDX98134 Canola extracellular 26.57 28.8
AT1G26450.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 27.05 28.43
CDY50312 Canola extracellular 28.99 27.91
CDY36415 Canola extracellular 26.09 27.55
Bra019700.1-P Field mustard extracellular 26.09 27.41
CDY65205 Canola plasma membrane 26.09 27.27
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 30.92 27.0
Bra038314.1-P Field mustard mitochondrion 28.02 25.66
AT1G13830.2 Thale cress mitochondrion, peroxisome, plastid, vacuole 25.6 25.12
Os01t0631500-01 Rice extracellular 28.99 21.51
Solyc04g005420.2.1 Tomato extracellular, vacuole 31.88 21.5
Os06t0665200-00 Rice cytosol 22.22 21.5
Os05t0581900-01 Rice extracellular 27.54 20.28
CDY47016 Canola extracellular 35.27 19.62
Os10t0347000-01 Rice endoplasmic reticulum, extracellular, vacuole 22.71 13.66
Os03t0833600-01 Rice plasma membrane 30.43 10.98
Os09t0560850-00 Rice cytosol, endoplasmic reticulum, peroxisome 21.74 7.75
Protein Annotations
MapMan:35.1EntrezGene:4326886EMBL:AK108127ProteinID:BAD87138.1ProteinID:BAF06252.1ProteinID:BAS74481.1
ProteinID:EEE55428.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0016020GO:GO:0016787GO:GO:0030246GO:GO:0030247
GO:GO:0046658EnsemblPlantsGene:Os01g0763900EnsemblPlants:Os01t0763900-01PFAM:PF07983PANTHER:PTHR32227PANTHER:PTHR32227:SF118
UniProt:Q5JN21SMART:SM00768SignalP:SignalP-noTMUniParc:UPI00004C28B2InterPro:X8RefSeq:XP_015614643.1
SEG:seg:::::
Description
X8 domain containing protein. (Os01t0763900-01)
Coordinates
chr1:-:32145847..32147094
Molecular Weight (calculated)
20174.6 Da
IEP (calculated)
6.711
GRAVY (calculated)
0.116
Length
207 amino acids
Sequence
(BLAST)
001: MATRLLLLLL LLLGMSLKGS EGAWCVCRPD VAEAALQKAL DYACGHGADC APVTPSGSCY SPNNVAAHCS YAANSYFQRN SQAKGATCDF GGAATLSSTD
101: PSSGTCKYPA TASAAGTSTG TGTAGAGTGT GTSTSTSTST SSPGSSTAAT GTPIMGGTFA TPIGGGASGP TTSALNPDSS EAPSPSLGRH LLLTCIASML
201: LSNFLLA
Best Arabidopsis Sequence Match ( AT1G18650.1 )
(BLAST)
001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS
Arabidopsis Description
PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.