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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY42854 Canola extracellular 97.95 97.95
Bra035941.1-P Field mustard extracellular 86.15 84.42
AT5G61130.1 Thale cress extracellular 83.59 81.09
Bra012981.1-P Field mustard extracellular, vacuole 86.67 76.13
Bra009313.1-P Field mustard extracellular 65.64 60.38
CDY47016 Canola extracellular 95.38 50.0
Bra026879.1-P Field mustard extracellular 33.33 45.77
GSMUA_Achr7P26650_001 Banana extracellular 26.67 44.83
GSMUA_Achr4P23440_001 Banana cytosol 34.36 44.67
GSMUA_Achr9P07140_001 Banana extracellular 41.54 43.55
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 44.1 43.43
Bra026880.1-P Field mustard extracellular 39.49 43.02
Os07t0600700-01 Rice extracellular 42.56 42.78
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 39.49 42.78
Bra026878.1-P Field mustard extracellular 30.77 42.55
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 43.59 42.5
Bra016724.1-P Field mustard extracellular 37.44 42.44
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 40.51 41.15
TraesCS5B01G399400.1 Wheat extracellular 33.33 41.14
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 43.08 40.98
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 39.49 40.31
EER97492 Sorghum extracellular 40.0 40.21
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 40.51 39.7
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 40.51 39.7
TraesCS5B01G398000.1 Wheat extracellular 33.33 39.63
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 37.95 39.36
Bra025116.1-P Field mustard extracellular 32.31 39.13
Bra019700.1-P Field mustard extracellular 39.49 39.09
Os03t0756300-01 Rice extracellular 34.87 38.86
GSMUA_Achr5P08900_001 Banana extracellular 37.44 38.42
TraesCS6D01G099100.1 Wheat endoplasmic reticulum, extracellular, vacuole 37.44 38.42
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 38.97 38.38
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 36.92 38.3
TraesCS5A01G393200.1 Wheat extracellular 32.31 37.72
OQU87600 Sorghum extracellular 35.9 37.23
TraesCS6B01G138700.1 Wheat endoplasmic reticulum, extracellular, vacuole 37.44 36.87
GSMUA_Achr8P28170_001 Banana extracellular 29.23 36.77
TraesCS5D01G403000.1 Wheat extracellular 31.28 36.75
TraesCS6A01G110400.1 Wheat endoplasmic reticulum, extracellular, vacuole 36.92 36.55
HORVU4Hr1G028360.1 Barley peroxisome, plastid 23.08 35.71
Bra012458.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 35.38 35.2
Os01t0763900-01 Rice extracellular 36.92 34.78
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 34.36 34.01
TraesCS3A01G302400.1 Wheat extracellular 33.85 33.67
TraesCS3D01G299600.1 Wheat extracellular 33.33 33.16
Zm00001d047293_P001 Maize endoplasmic reticulum, extracellular, vacuole 33.33 33.16
Zm00001d029539_P001 Maize endoplasmic reticulum, extracellular, vacuole 33.85 33.0
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 40.0 32.1
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 33.85 31.28
Zm00001d010728_P005 Maize extracellular 34.36 30.59
Bra004003.1-P Field mustard extracellular 33.85 30.28
Os05t0512600-01 Rice extracellular 35.38 30.26
Bra035382.1-P Field mustard extracellular 18.46 30.25
TraesCS1B01G346200.2 Wheat endoplasmic reticulum, extracellular, vacuole 32.31 30.14
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 34.87 30.09
Zm00001d013250_P003 Maize extracellular 34.36 29.91
EES18492 Sorghum extracellular 34.36 29.26
TraesCS1D01G335200.1 Wheat endoplasmic reticulum, extracellular, vacuole 32.31 29.03
HORVU2Hr1G033470.1 Barley cytosol, plastid 44.1 28.96
TraesCS1A01G332500.1 Wheat extracellular 30.26 28.23
Bra034233.1-P Field mustard cytosol 15.9 28.18
Zm00001d038682_P001 Maize extracellular 32.31 27.39
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 32.82 26.23
Bra032719.1-P Field mustard endoplasmic reticulum, extracellular 27.69 26.09
KXG37528 Sorghum mitochondrion 34.87 25.66
Bra038314.1-P Field mustard mitochondrion 29.23 25.22
HORVU5Hr1G096090.6 Barley plastid 30.26 25.21
TraesCS5A01G548300.1 Wheat plasma membrane 25.13 25.0
Bra004688.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 22.56 24.44
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 34.36 24.36
Bra003318.1-P Field mustard extracellular 21.03 24.12
HORVU3Hr1G074010.3 Barley cytosol, plastid 34.36 23.02
Bra020023.1-P Field mustard endoplasmic reticulum, vacuole 25.64 16.95
Bra030780.1-P Field mustard endoplasmic reticulum, extracellular 26.15 16.61
Bra010831.1-P Field mustard nucleus 22.56 15.28
Bra032314.1-P Field mustard plastid 27.69 14.25
Bra021679.1-P Field mustard extracellular, plasma membrane, vacuole 21.54 13.91
Bra008414.1-P Field mustard cytosol, nucleus, plastid, vacuole 17.95 10.84
Bra031835.1-P Field mustard vacuole 21.03 10.82
Bra035122.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 20.0 9.97
Protein Annotations
EnsemblPlants:Bra029334.1EnsemblPlants:Bra029334.1-PEnsemblPlantsGene:Bra029334InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF237
PFAM:PF07983SEG:segSignalP:SignalP-noTMSMART:SM00768UniParc:UPI00025457F2UniProt:M4EKL7
MapMan:35.1:::::
Description
AT5G61130 (E=1e-067) PDCB1 | PDCB1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1); callose binding / polysaccharide binding
Coordinates
chrA02:-:25811715..25813494
Molecular Weight (calculated)
19857.9 Da
IEP (calculated)
7.214
GRAVY (calculated)
-0.123
Length
195 amino acids
Sequence
(BLAST)
001: MAALVLSLLL LAMAGHSSAA WCVCKTGLSD DVLQKTIDYA CGNGADCNPT HPKAPCFNPD NVTSHCNYAV NSFFQKKRQA SGTCDFSGTA TPTNSDPSYS
101: GCTFPTSASG SGGSTTGTTN PKGNSTSTTL PGGNSPYSGT STNGVFGNNS TGATGTGVNP DYTTESSAFA LKNSSKLFTF LVLIASSGFC SFLML
Best Arabidopsis Sequence Match ( AT5G61130.1 )
(BLAST)
001: MAALVLSLLL LSLAGHSSAS WCVCKTGLSD TVLQATLDYA CGNGADCNPT KPKQSCFNPD NVRSHCNYAV NSFFQKKGQS PGSCNFDGTA TPTNSDPSYT
101: GCAFPTSASG SSGSTTVTPG TTNPKGSPTT TTLPGSGTNS PYSGNPTNGV FGGNSTGGTT GTGINPDYTT DSSAFALKNS SKLFICLLLI ASSGFCSFLM
201: L
Arabidopsis Description
PDCB1PDCB1 [Source:UniProtKB/TrEMBL;Acc:A0A178URD1]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.