Factsheet for Zm00001d038682_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18492	Sorghum	extracellular	85.22	85.59
Zm00001d010728_P005	Maize	extracellular	78.7	82.65
Os05t0512600-01	Rice	extracellular	57.39	57.89
HORVU1Hr1G077100.2	Barley	endoplasmic reticulum, extracellular, vacuole	51.3	55.92
TraesCS1A01G332500.1	Wheat	extracellular	49.13	54.07
TraesCS1B01G346200.2	Wheat	endoplasmic reticulum, extracellular, vacuole	48.7	53.59
TraesCS1D01G335200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	50.43	53.46
KRH54678	Soybean	extracellular, nucleus	20.43	42.34
Zm00001d022059_P001	Maize	endoplasmic reticulum, extracellular	36.09	41.92
Zm00001d043361_P001	Maize	endoplasmic reticulum, extracellular	31.74	38.83
Zm00001d006776_P001	Maize	endoplasmic reticulum, extracellular, vacuole	32.61	37.69
Zm00001d006777_P003	Maize	endoplasmic reticulum, extracellular, vacuole	32.61	37.69
KRH03122	Soybean	extracellular, nucleus	32.61	36.95
PGSC0003DMT400045877	Potato	extracellular	16.96	36.45
GSMUA_Achr7P26650_001	Banana	extracellular	17.83	35.34
Zm00001d047293_P001	Maize	endoplasmic reticulum, extracellular, vacuole	30.0	35.2
Zm00001d029539_P001	Maize	endoplasmic reticulum, extracellular, vacuole	29.57	34.0
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	27.83	33.51
Solyc05g012380.2.1	Tomato	extracellular	29.13	33.17
CDY42854	Canola	extracellular	27.83	32.82
GSMUA_Achr1P04440_001	Banana	endoplasmic reticulum, extracellular, vacuole	27.39	32.81
Bra035941.1-P	Field mustard	extracellular	28.26	32.66
GSMUA_Achr5P08900_001	Banana	extracellular	26.96	32.63
PGSC0003DMT400072939	Potato	extracellular	29.13	32.52
Bra029334.1-P	Field mustard	extracellular	27.39	32.31
CDY16822	Canola	extracellular	27.83	32.16
KRG89485	Soybean	extracellular	24.35	31.82
CDX87201	Canola	extracellular	27.39	31.66
CDY23085	Canola	extracellular, plasma membrane, vacuole	26.52	31.61
KRH56823	Soybean	extracellular	29.13	31.46
VIT_17s0000g07260.t01	Wine grape	extracellular	28.26	31.4
CDY02987	Canola	extracellular	21.74	31.06
CDY51213	Canola	extracellular	21.74	31.06
GSMUA_Achr8P28170_001	Banana	extracellular	20.87	30.97
CDY02169	Canola	extracellular	26.09	30.93
KRH50525	Soybean	extracellular	24.35	30.6
Solyc03g115200.2.1	Tomato	extracellular	24.78	30.48
AT1G18650.1	Thale cress	extracellular	24.35	30.43
Bra025116.1-P	Field mustard	extracellular	21.3	30.43
CDX83826	Canola	extracellular	24.35	30.43
Bra026879.1-P	Field mustard	extracellular	18.7	30.28
CDX96707	Canola	extracellular	24.35	30.27
PGSC0003DMT400063348	Potato	extracellular	24.35	30.27
VIT_01s0011g00570.t01	Wine grape	extracellular	25.22	30.05
Bra026878.1-P	Field mustard	extracellular	18.26	29.79
KRH75030	Soybean	extracellular	27.83	29.77
CDY26741	Canola	extracellular	23.91	29.57
GSMUA_Achr9P07140_001	Banana	extracellular	23.91	29.57
PGSC0003DMT400003054	Potato	extracellular	24.35	29.32
CDY19232	Canola	extracellular	23.91	29.26
CDY65418	Canola	cytosol	18.7	29.25
Bra016724.1-P	Field mustard	extracellular	21.74	29.07
CDX96880	Canola	extracellular	21.74	29.07
CDY34558	Canola	extracellular	21.74	29.07
Bra026880.1-P	Field mustard	extracellular	22.61	29.05
CDY16114	Canola	extracellular	22.61	29.05
CDY33795	Canola	extracellular	22.61	29.05
CDY16115	Canola	extracellular	19.57	29.03
KRH70882	Soybean	extracellular	27.39	29.03
Zm00001d016545_P001	Maize	extracellular	23.48	28.88
CDY65205	Canola	plasma membrane	24.78	28.79
Solyc01g010310.2.1	Tomato	extracellular	23.48	28.57
Zm00001d050544_P001	Maize	extracellular	23.04	28.34
Bra009313.1-P	Field mustard	extracellular	26.09	28.3
CDX69983	Canola	extracellular	26.09	28.3
CDX98134	Canola	extracellular	23.48	28.27
AT2G03505.1	Thale cress	extracellular	20.43	27.98
AT5G61130.1	Thale cress	extracellular	24.35	27.86
Bra012458.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	23.48	27.55
CDY40247	Canola	endoplasmic reticulum, extracellular, vacuole	23.48	27.55
Bra004003.1-P	Field mustard	extracellular	25.65	27.06
CDY04273	Canola	extracellular	25.65	27.06
CDY07353	Canola	extracellular	25.65	27.06
CDY36415	Canola	extracellular	23.04	27.04
Bra012981.1-P	Field mustard	extracellular, vacuole	26.09	27.03
Bra019700.1-P	Field mustard	extracellular	23.04	26.9
CDY54140	Canola	extracellular	24.35	26.79
Zm00001d046155_P001	Maize	extracellular	20.43	26.7
AT1G26450.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	22.61	26.4
CDX99038	Canola	extracellular	26.96	26.38
AT1G69295.1	Thale cress	extracellular	24.78	25.68
CDY50312	Canola	extracellular	23.91	25.58
AT5G08000.2	Thale cress	extracellular	23.48	25.35
CDY40909	Canola	endoplasmic reticulum, extracellular, plasma membrane	25.65	24.89
GSMUA_Achr4P10810_001	Banana	endoplasmic reticulum, nucleus, plasma membrane	26.09	24.69
Bra038314.1-P	Field mustard	mitochondrion	22.17	22.57
Zm00001d013250_P003	Maize	extracellular	21.3	21.88
AT1G13830.2	Thale cress	mitochondrion, peroxisome, plastid, vacuole	20.0	21.8
Zm00001d007864_P001	Maize	extracellular	16.52	21.47
Zm00001d009686_P002	Maize	extracellular	22.61	21.22
Zm00001d034062_P001	Maize	cytosol, golgi, peroxisome	21.3	20.08
Zm00001d039139_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	22.61	20.08
Zm00001d042912_P001	Maize	nucleus	15.22	19.66
Solyc04g005420.2.1	Tomato	extracellular, vacuole	25.65	19.22
Zm00001d011431_P001	Maize	plasma membrane	24.78	18.45
CDY47016	Canola	extracellular	27.39	16.94
Zm00001d004933_P001	Maize	endoplasmic reticulum, extracellular, vacuole	21.3	14.37
Zm00001d002348_P001	Maize	endoplasmic reticulum, plasma membrane, plastid	15.65	10.98
Zm00001d034729_P002	Maize	endoplasmic reticulum, vacuole	20.87	9.78
Zm00001d026281_P003	Maize	plastid	20.0	8.39
Zm00001d012917_P001	Maize	plasma membrane	21.3	7.99
Zm00001d006343_P001	Maize	endoplasmic reticulum, plastid, vacuole	16.52	6.63

Protein Annotations

EntrezGene:100279409	MapMan:35.1	ProteinID:AQK87542.1	UniProt:B7ZY01	EMBL:BT054193	EMBL:BT087650
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PFAM:PF07983	PANTHER:PTHR32227	PANTHER:PTHR32227:SF147
SMART:SM00768	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001917162	InterPro:X8	EnsemblPlantsGene:Zm00001d038682
EnsemblPlants:Zm00001d038682_P001	EnsemblPlants:Zm00001d038682_T001	SEG:seg	:	:	:

Description

PLASMODESMATA CALLOSE-BINDING PROTEIN 2

Coordinates

chr6:+:162456348..162458598

Molecular Weight (calculated)

21347.2 Da

IEP (calculated)

7.904

GRAVY (calculated)

0.272

Length

230 amino acids

Sequence
(BLAST)

001: MAVPLLLLLL LSVFTASDAA FCVCKPGMSD QMMQSAIDYA CSKGADCAST TKGAPCYGNG NKVAVCSYIC NSYYQSRSGM GATCDFNGVA TLTGTDPSSG
101: TCKFASGPSS VGTGGGAGMG TGGAGAGVGG GTGAGAGTGA GMGAGAGTGA GTGMGAGTGT STGAGAGTGT GAGITTPGAL SPPFGGTGAY GPSGAGSTDY
201: NDAAARRVSR LHVVAALVFG LAAAAAPLLR

Best Arabidopsis Sequence Match ( AT1G18650.1 )
(BLAST)

001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS

Arabidopsis Description

PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.