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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96880 Canola extracellular 94.19 94.19
CDY33795 Canola extracellular 77.33 74.3
CDY16114 Canola extracellular 76.74 73.74
CDY16115 Canola extracellular 63.95 70.97
CDY02987 Canola extracellular 62.21 66.46
CDY36415 Canola extracellular 74.42 65.31
CDY51213 Canola extracellular 61.05 65.22
CDX98134 Canola extracellular 72.09 64.92
CDY65418 Canola cytosol 53.49 62.59
AT1G13830.2 Thale cress mitochondrion, peroxisome, plastid, vacuole 73.84 60.19
PGSC0003DMT400045877 Potato extracellular 31.98 51.4
KRG89485 Soybean extracellular 43.6 42.61
KRH50525 Soybean extracellular 44.77 42.08
VIT_01s0011g00570.t01 Wine grape extracellular 44.19 39.38
CDY42854 Canola extracellular 43.02 37.95
KRH75030 Soybean extracellular 47.09 37.67
KRH70882 Soybean extracellular 47.09 37.33
CDX87201 Canola extracellular 43.02 37.19
CDY16822 Canola extracellular 43.02 37.19
CDY26741 Canola extracellular 40.12 37.1
CDX96707 Canola extracellular 38.95 36.22
CDY19232 Canola extracellular 39.53 36.17
CDX83826 Canola extracellular 38.37 35.87
CDY23085 Canola extracellular, plasma membrane, vacuole 40.12 35.75
CDY02169 Canola extracellular 39.53 35.05
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 40.12 34.85
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 40.12 34.5
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 36.05 34.44
EER97492 Sorghum extracellular 38.37 34.02
GSMUA_Achr4P23440_001 Banana cytosol 29.65 34.0
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 37.79 33.85
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 37.21 33.51
GSMUA_Achr9P07140_001 Banana extracellular 36.05 33.33
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 39.53 33.17
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 37.79 33.16
Os03t0756300-01 Rice extracellular 33.14 32.57
TraesCS5B01G398000.1 Wheat extracellular 30.81 32.32
GSMUA_Achr8P28170_001 Banana extracellular 29.07 32.26
TraesCS6D01G099100.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.47 32.11
CDX74636 Canola extracellular 22.09 31.93
GSMUA_Achr7P26650_001 Banana extracellular 21.51 31.9
CDX69983 Canola extracellular 38.95 31.6
Os07t0600700-01 Rice extracellular 35.47 31.44
CDY65205 Canola plasma membrane 36.05 31.31
TraesCS5A01G393200.1 Wheat extracellular 30.23 31.14
CDY47296 Canola extracellular 21.51 31.09
GSMUA_Achr5P08900_001 Banana extracellular 34.3 31.05
TraesCS6A01G110400.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.47 30.96
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 33.72 30.85
TraesCS6B01G138700.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.47 30.81
TraesCS5D01G403000.1 Wheat extracellular 29.65 30.72
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 35.47 30.65
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 35.47 30.65
TraesCS5B01G399400.1 Wheat extracellular 27.91 30.38
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 34.88 30.3
CDY54140 Canola extracellular 36.63 30.14
CDY50312 Canola extracellular 37.21 29.77
CDY04273 Canola extracellular 37.21 29.36
CDY07353 Canola extracellular 37.21 29.36
CDX99038 Canola extracellular 38.95 28.51
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 32.56 28.43
CDY56715 Canola cytosol 18.6 28.32
Zm00001d047293_P001 Maize endoplasmic reticulum, extracellular, vacuole 31.98 28.06
Zm00001d029539_P001 Maize endoplasmic reticulum, extracellular, vacuole 32.56 28.0
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 34.3 27.96
HORVU4Hr1G028360.1 Barley peroxisome, plastid 20.35 27.78
TraesCS1B01G346200.2 Wheat endoplasmic reticulum, extracellular, vacuole 33.14 27.27
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 29.65 27.13
Os01t0763900-01 Rice extracellular 32.56 27.05
TraesCS1A01G332500.1 Wheat extracellular 32.56 26.79
CDY21992 Canola cytosol 22.09 26.76
CDY48582 Canola cytosol 22.09 26.76
CDY47357 Canola endoplasmic reticulum, extracellular 29.07 26.74
OQU87600 Sorghum extracellular 29.07 26.6
TraesCS3A01G302400.1 Wheat extracellular 30.23 26.53
TraesCS3D01G299600.1 Wheat extracellular 30.23 26.53
CDY01142 Canola extracellular 29.07 26.45
TraesCS1D01G335200.1 Wheat endoplasmic reticulum, extracellular, vacuole 33.14 26.27
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 36.05 26.16
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 35.47 25.1
Os05t0512600-01 Rice extracellular 33.14 25.0
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 31.98 24.34
Solyc04g005420.2.1 Tomato extracellular, vacuole 42.44 23.78
Zm00001d010728_P005 Maize extracellular 29.65 23.29
Zm00001d013250_P003 Maize extracellular 30.23 23.21
HORVU2Hr1G033470.1 Barley cytosol, plastid 38.95 22.56
EES18492 Sorghum extracellular 29.65 22.27
TraesCS5A01G548300.1 Wheat plasma membrane 25.0 21.94
CDY05067 Canola endoplasmic reticulum, extracellular 15.7 21.77
Zm00001d038682_P001 Maize extracellular 29.07 21.74
CDX79873 Canola endoplasmic reticulum, extracellular, plasma membrane 22.09 21.23
CDX90730 Canola endoplasmic reticulum, extracellular 15.12 20.8
CDY72034 Canola endoplasmic reticulum, extracellular 14.53 20.66
CDY70929 Canola extracellular 21.51 20.56
CDX97778 Canola extracellular 26.74 20.09
CDY29629 Canola extracellular 26.74 20.09
CDX98264 Canola endoplasmic reticulum, extracellular, plasma membrane 19.77 20.0
KXG37528 Sorghum mitochondrion 30.81 20.0
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 27.91 19.67
CDY56240 Canola extracellular 19.77 19.65
CDY47016 Canola extracellular 42.44 19.62
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 30.81 19.27
HORVU5Hr1G096090.6 Barley plastid 25.58 18.8
HORVU3Hr1G074010.3 Barley cytosol, plastid 30.81 18.21
CDX99818 Canola extracellular 29.65 17.29
CDY43335 Canola extracellular 27.91 16.27
CDY48334 Canola vacuole 29.65 16.24
CDX90189 Canola extracellular 28.49 15.61
CDX94970 Canola plastid 25.58 14.86
CDY64750 Canola endoplasmic reticulum, vacuole 25.58 14.62
CDY31085 Canola plastid 24.42 11.97
CDY32184 Canola vacuole 24.42 11.9
CDY56795 Canola cytosol, nucleus, plastid, vacuole 21.51 11.82
CDX87377 Canola endoplasmic reticulum, extracellular, vacuole 23.84 10.65
CDX88545 Canola endoplasmic reticulum, extracellular, vacuole 23.84 10.54
CDY37850 Canola vacuole 21.51 9.74
CDY43577 Canola vacuole 21.51 9.69
Protein Annotations
EnsemblPlants:CDY34558EnsemblPlantsGene:GSBRNA2T00056978001InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF147PFAM:PF07983
ProteinID:CDY34558ProteinID:CDY34558.1SEG:segSignalP:SignalP-noTMSMART:SM00768TMHMM:TMhelix
UniParc:UPI0004EF2BC4UniProt:A0A078HCR4MapMan:35.1:::
Description
BnaC03g56580DBnaC03g56580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCR4]
Coordinates
chrLK032337:+:52625..53332
Molecular Weight (calculated)
17984.3 Da
IEP (calculated)
7.638
GRAVY (calculated)
0.128
Length
172 amino acids
Sequence
(BLAST)
001: MRVFLGLLLL LALTKSSSAI YCLCKDGIGE KELQLAIDYA CGSLADCNPI HDNGPCYQPN NIKSHCDWAV NSYFQKAAQV SGSCNFSGTA TTNQNPPSNL
101: VTGCIYPSSA STTSPTGTTL TNGTTPAFGP TGTGGFPGNG ASSLVISPVF TLCFSSLVFL WGSNVRLGFR HV
Best Arabidopsis Sequence Match ( AT1G13830.1 )
(BLAST)
001: MKVLLGLLLL LSLTNSSSAI YCLCKDGIGD TELQTSIDYA CGTLADCNPI HDKGTCYQPD TIKSHCDWAV NSYFQNAAQV PGSCNFSGTA TTNPNPPSNL
101: ANGCIYPSSP SSTRSPPSTT PPTGTTPTNG TTPFPGTPFP GTPFPGTPPV FGPTGVFNPS NPGSGASSLG TSSVFTLCFS LLAFLWGSDV RFGFSHV
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:TAIR;Acc:AT1G13830]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.