CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034233.1-P	Field mustard	cytosol	80.53	82.73
CDY48582	Canola	cytosol	89.38	71.13
CDY21992	Canola	cytosol	89.38	71.13
AT4G05430.3	Thale cress	extracellular, plasma membrane	79.65	53.57
PGSC0003DMT400059279	Potato	cytosol	55.75	52.94
GSMUA_Achr7P07950_001	Banana	extracellular	54.87	46.62
GSMUA_Achr5P24740_001	Banana	endoplasmic reticulum, extracellular	51.33	40.56
KRH59215	Soybean	extracellular	59.29	37.02
Solyc04g058080.2.1	Tomato	extracellular	56.64	35.96
CDY47296	Canola	extracellular	37.17	35.29
CDX74636	Canola	extracellular	36.28	34.45
TraesCS2D01G253000.1	Wheat	extracellular	50.44	32.95
TraesCS2B01G272100.1	Wheat	extracellular	50.44	32.95
TraesCS2A01G252300.1	Wheat	extracellular	50.44	32.95
Zm00001d007864_P001	Maize	extracellular	51.33	32.77
OQU88437	Sorghum	extracellular	50.44	32.39
VIT_10s0003g04340.t01	Wine grape	plasma membrane	59.29	32.37
CDY05067	Canola	endoplasmic reticulum, extracellular	32.74	29.84
CDX90730	Canola	endoplasmic reticulum, extracellular	32.74	29.6
CDY72034	Canola	endoplasmic reticulum, extracellular	30.09	28.1
CDX98264	Canola	endoplasmic reticulum, extracellular, plasma membrane	38.05	25.29
CDY56240	Canola	extracellular	37.17	24.28
CDX79873	Canola	endoplasmic reticulum, extracellular, plasma membrane	36.28	22.91
CDY70929	Canola	extracellular	35.4	22.22
CDY47357	Canola	endoplasmic reticulum, extracellular	36.28	21.93
CDX83826	Canola	extracellular	35.4	21.74
CDY01142	Canola	extracellular	36.28	21.69
CDX96707	Canola	extracellular	35.4	21.62
CDY16115	Canola	extracellular	29.2	21.29
CDY26741	Canola	extracellular	34.51	20.97
CDY19232	Canola	extracellular	34.51	20.74
CDY51213	Canola	extracellular	29.2	20.5
CDY65418	Canola	cytosol	26.55	20.41
CDY02987	Canola	extracellular	28.32	19.88
CDY34558	Canola	extracellular	28.32	18.6
CDX96880	Canola	extracellular	28.32	18.6
CDY29629	Canola	extracellular	37.17	18.34
CDX97778	Canola	extracellular	37.17	18.34
CDY16822	Canola	extracellular	31.86	18.09
CDX87201	Canola	extracellular	31.86	18.09
CDY23085	Canola	extracellular, plasma membrane, vacuole	30.09	17.62
CDY02169	Canola	extracellular	30.09	17.53
CDX69983	Canola	extracellular	32.74	17.45
CDY42854	Canola	extracellular	29.2	16.92
CDY16114	Canola	extracellular	26.55	16.76
CDY33795	Canola	extracellular	26.55	16.76
CDX94970	Canola	plastid	43.36	16.55
CDY64750	Canola	endoplasmic reticulum, vacuole	43.36	16.28
CDX98134	Canola	extracellular	27.43	16.23
CDY36415	Canola	extracellular	27.43	15.82
CDX99038	Canola	extracellular	32.74	15.74
CDX99818	Canola	extracellular	40.71	15.59
CDY54140	Canola	extracellular	28.32	15.31
CDY40247	Canola	endoplasmic reticulum, extracellular, vacuole	26.55	15.31
CDY43335	Canola	extracellular	39.82	15.25
CDY65205	Canola	plasma membrane	26.55	15.15
CDY50312	Canola	extracellular	28.32	14.88
CDY48334	Canola	vacuole	40.71	14.65
CDX90189	Canola	extracellular	39.82	14.33
CDY04273	Canola	extracellular	27.43	14.22
CDY07353	Canola	extracellular	27.43	14.22
CDY31085	Canola	plastid	41.59	13.39
CDY32184	Canola	vacuole	41.59	13.31
CDY40909	Canola	endoplasmic reticulum, extracellular, plasma membrane	27.43	13.08
CDY56795	Canola	cytosol, nucleus, plastid, vacuole	33.63	12.14
CDY37850	Canola	vacuole	36.28	10.79
CDY43577	Canola	vacuole	36.28	10.73
CDX87377	Canola	endoplasmic reticulum, extracellular, vacuole	34.51	10.13
CDX88545	Canola	endoplasmic reticulum, extracellular, vacuole	34.51	10.03
CDY47016	Canola	extracellular	29.2	8.87

Protein Annotations

EnsemblPlants:CDY56715	EnsemblPlantsGene:GSBRNA2T00019949001	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF98	PFAM:PF07983
ProteinID:CDY56715	ProteinID:CDY56715.1	SMART:SM00768	UniParc:UPI0004EDF4C7	UniProt:A0A078IXP7	MapMan:35.1

Description

BnaC01g38720DBnaC01g38720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXP7]

Coordinates

chrLK033513:+:45268..46695

Molecular Weight (calculated)

12612.7 Da

IEP (calculated)

7.203

GRAVY (calculated)

-0.329

Length

113 amino acids

Sequence
(BLAST)

001: MYNIGFYVRP IRAEGNTTFL DGRTWCVARP SASQAELQRA LDWGCGIGRV DCSVIEKHGD CYEPDTIWSH ASFAFNVYYQ TNGNNRIACY FGGTATLTKI
101: NPSYGTCSYD VSK

Best Arabidopsis Sequence Match ( AT4G05430.3 )
(BLAST)

001: MRTQFWIFLL FLLLLNFFSQ AARPVMTIRP ESLVGPQGNT TFLEGTTWCV ARPGATQAEL QRALDWACGI GRVDCSVIER HGDCYEPDTI VSHASFAFNA
101: YYQTNGNNRI ACYFGGTATF TKINPSYGKC SYDASKSEVS TARSLSEYKA RWLLLMYIGV FSLISRRD

Arabidopsis Description

Carbohydrate-binding X8 domain superfamily protein [Source:TAIR;Acc:AT4G05430]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.