Factsheet for GSMUA_Achr7P07950_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
golgi 4
plasma membrane 5
endoplasmic reticulum 4
vacuole 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P24740_001	Banana	endoplasmic reticulum, extracellular	76.69	71.33
PGSC0003DMT400059279	Potato	cytosol	57.14	63.87
Bra034233.1-P	Field mustard	cytosol	45.86	55.45
CDY56715	Canola	cytosol	46.62	54.87
TraesCS2A01G252300.1	Wheat	extracellular	67.67	52.02
TraesCS2D01G253000.1	Wheat	extracellular	66.92	51.45
TraesCS2B01G272100.1	Wheat	extracellular	66.92	51.45
OQU88437	Sorghum	extracellular	63.91	48.3
KRH59215	Soybean	extracellular	65.41	48.07
Zm00001d007864_P001	Maize	extracellular	63.16	47.46
CDY48582	Canola	cytosol	49.62	46.48
CDY21992	Canola	cytosol	49.62	46.48
Solyc04g058080.2.1	Tomato	extracellular	61.65	46.07
VIT_10s0003g04340.t01	Wine grape	plasma membrane	64.66	41.55
AT4G05430.3	Thale cress	extracellular, plasma membrane	51.88	41.07
GSMUA_Achr11P...	Banana	extracellular	33.83	37.82
GSMUA_Achr9P09230_001	Banana	extracellular	33.83	37.19
GSMUA_Achr7P26650_001	Banana	extracellular	30.83	35.34
GSMUA_Achr3P16040_001	Banana	mitochondrion	36.84	35.0
GSMUA_Achr3P31190_001	Banana	cytosol, nucleus, plastid	38.35	34.23
GSMUA_Achr8P28170_001	Banana	extracellular	34.59	29.68
GSMUA_Achr9P07170_001	Banana	extracellular	39.85	29.61
GSMUA_Achr6P27540_001	Banana	extracellular	39.1	28.26
GSMUA_Achr10P...	Banana	extracellular	36.09	27.12
GSMUA_Achr5P08900_001	Banana	extracellular	36.84	25.79
GSMUA_Achr1P04440_001	Banana	endoplasmic reticulum, extracellular, vacuole	36.84	25.52
GSMUA_Achr4P23440_001	Banana	cytosol	28.57	25.33
GSMUA_Achr4P32790_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	32.33	23.89
GSMUA_Achr9P07140_001	Banana	extracellular	33.08	23.66
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	33.83	23.56
GSMUA_Achr8P33530_001	Banana	cytosol, extracellular, plastid, vacuole	35.34	22.82
GSMUA_Achr4P14960_001	Banana	endoplasmic reticulum, extracellular	38.35	21.43
GSMUA_Achr4P10810_001	Banana	endoplasmic reticulum, nucleus, plasma membrane	36.09	19.75
GSMUA_Achr6P00220_001	Banana	nucleus	36.09	15.84
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, vacuole	36.84	13.84
GSMUA_Achr2P02010_001	Banana	cytosol	45.11	12.79
GSMUA_Achr11P...	Banana	extracellular, plastid, vacuole	42.11	10.63

Protein Annotations

EnsemblPlants:GSMUA_Achr7P07950_001	EnsemblPlants:GSMUA_Achr7T07950_001	EnsemblPlantsGene:GSMUA_Achr7G07950_001	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF118
PFAM:PF07983	SignalP:SignalP-noTM	SMART:SM00768	UniParc:UPI000295608E	UniProt:M0TFN5	MapMan:35.1

Description

Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr7G07950_001]

Coordinates

chr7:+:5917693..5918255

Molecular Weight (calculated)

14226.7 Da

IEP (calculated)

3.855

GRAVY (calculated)

0.064

Length

133 amino acids

Sequence
(BLAST)

001: MDIMLLYDLF VALGVILQQK AESTIPIPTF SPPEGNTTFV EGTTWCVARP GVSQFDLQNA LDWACGLGAA DCSLVQPGAA CYDPDTLLGH ASYAFNSYYQ
101: QNGNSDIACY FGGTAIITNR DPSYGSCKYL SSG

Best Arabidopsis Sequence Match ( AT4G05430.3 )
(BLAST)

001: MRTQFWIFLL FLLLLNFFSQ AARPVMTIRP ESLVGPQGNT TFLEGTTWCV ARPGATQAEL QRALDWACGI GRVDCSVIER HGDCYEPDTI VSHASFAFNA
101: YYQTNGNNRI ACYFGGTATF TKINPSYGKC SYDASKSEVS TARSLSEYKA RWLLLMYIGV FSLISRRD

Arabidopsis Description

Carbohydrate-binding X8 domain superfamily protein [Source:TAIR;Acc:AT4G05430]
SUBAcon: [extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.