Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU88437 | Sorghum | extracellular | 88.14 | 88.64 |
| TraesCS2B01G272100.1 | Wheat | extracellular | 71.75 | 73.41 |
| TraesCS2A01G252300.1 | Wheat | extracellular | 71.19 | 72.83 |
| TraesCS2D01G253000.1 | Wheat | extracellular | 70.06 | 71.68 |
| PGSC0003DMT400059279 | Potato | cytosol | 42.94 | 63.87 |
| GSMUA_Achr7P07950_001 | Banana | extracellular | 47.46 | 63.16 |
| GSMUA_Achr5P24740_001 | Banana | endoplasmic reticulum, extracellular | 50.28 | 62.24 |
| Bra034233.1-P | Field mustard | cytosol | 33.9 | 54.55 |
| CDY56715 | Canola | cytosol | 32.77 | 51.33 |
| CDY48582 | Canola | cytosol | 37.85 | 47.18 |
| CDY21992 | Canola | cytosol | 37.85 | 47.18 |
| KRH59215 | Soybean | extracellular | 47.46 | 46.41 |
| Solyc04g058080.2.1 | Tomato | extracellular | 46.33 | 46.07 |
| VIT_10s0003g04340.t01 | Wine grape | plasma membrane | 49.72 | 42.51 |
| AT4G05430.3 | Thale cress | extracellular, plasma membrane | 39.55 | 41.67 |
| Zm00001d046155_P001 | Maize | extracellular | 28.25 | 28.41 |
| Zm00001d043361_P001 | Maize | endoplasmic reticulum, extracellular | 29.38 | 27.66 |
| Zm00001d016545_P001 | Maize | extracellular | 26.55 | 25.13 |
| Zm00001d050544_P001 | Maize | extracellular | 25.99 | 24.6 |
| Zm00001d009686_P002 | Maize | extracellular | 31.64 | 22.86 |
| Zm00001d047293_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 24.86 | 22.45 |
| Zm00001d022059_P001 | Maize | endoplasmic reticulum, extracellular | 24.86 | 22.22 |
| Zm00001d006777_P003 | Maize | endoplasmic reticulum, extracellular, vacuole | 24.86 | 22.11 |
| Zm00001d006776_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 24.86 | 22.11 |
| Zm00001d042912_P001 | Maize | nucleus | 22.03 | 21.91 |
| Zm00001d029539_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 24.29 | 21.5 |
| Zm00001d039139_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 31.07 | 21.24 |
| Zm00001d013250_P003 | Maize | extracellular | 25.99 | 20.54 |
| Zm00001d034062_P001 | Maize | cytosol, golgi, peroxisome | 27.68 | 20.08 |
| Zm00001d011431_P001 | Maize | plasma membrane | 32.2 | 18.45 |
| Zm00001d010728_P005 | Maize | extracellular | 21.47 | 17.35 |
| Zm00001d004933_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 32.2 | 16.72 |
| Zm00001d038682_P001 | Maize | extracellular | 21.47 | 16.52 |
| Zm00001d002348_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid | 25.42 | 13.72 |
| Zm00001d034729_P002 | Maize | endoplasmic reticulum, vacuole | 31.64 | 11.41 |
| Zm00001d026281_P003 | Maize | plastid | 29.94 | 9.67 |
| Zm00001d012917_P001 | Maize | plasma membrane | 31.64 | 9.14 |
| Zm00001d006343_P001 | Maize | endoplasmic reticulum, plastid, vacuole | 25.99 | 8.03 |
Protein Annotations
| EnsemblPlants:Zm00001d007864_P001 | EnsemblPlants:Zm00001d007864_T001 | EnsemblPlantsGene:Zm00001d007864 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 |
| PFAM:PF07983 | ProteinID:ONM27753.1 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 | TMHMM:TMhelix |
| UniParc:UPI000843A6BF | UniProt:A0A1D6F9C7 | MapMan:35.1 | : | : | : |
Description
Carbohydrate-binding X8 domain superfamily protein
Coordinates
chr2:-:241250798..241252215
Molecular Weight (calculated)
18709.3 Da
IEP (calculated)
7.209
GRAVY (calculated)
0.064
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRKELVIMH GGVLVLGWFI ASAAAGRLAP QEKAESVTPI PTLSPPEGNT TFIDGVTWCV ARPGATQEDL QSALDWACGP GGADCSQLQP GGRCYQPDTL
101: LTHASYAFNI FYQQNGNSDV ACNFGGAGAL VKRDPSFGSC KFLASETSAA AASSAMLDRR AWIAMVAASL IALWRRL
101: LTHASYAFNI FYQQNGNSDV ACNFGGAGAL VKRDPSFGSC KFLASETSAA AASSAMLDRR AWIAMVAASL IALWRRL
001: MRTQFWIFLL FLLLLNFFSQ AARPVMTIRP ESLVGPQGNT TFLEGTTWCV ARPGATQAEL QRALDWACGI GRVDCSVIER HGDCYEPDTI VSHASFAFNA
101: YYQTNGNNRI ACYFGGTATF TKINPSYGKC SYDASKSEVS TARSLSEYKA RWLLLMYIGV FSLISRRD
101: YYQTNGNNRI ACYFGGTATF TKINPSYGKC SYDASKSEVS TARSLSEYKA RWLLLMYIGV FSLISRRD
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:TAIR;Acc:AT4G05430]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.