Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plasma membrane 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g058080.2.1 | Tomato | extracellular | 90.76 | 60.67 |
| Bra034233.1-P | Field mustard | cytosol | 55.46 | 60.0 |
| GSMUA_Achr7P07950_001 | Banana | extracellular | 63.87 | 57.14 |
| CDY56715 | Canola | cytosol | 52.94 | 55.75 |
| KRH59215 | Soybean | extracellular | 74.79 | 49.17 |
| CDY21992 | Canola | cytosol | 57.98 | 48.59 |
| CDY48582 | Canola | cytosol | 57.98 | 48.59 |
| GSMUA_Achr5P24740_001 | Banana | endoplasmic reticulum, extracellular | 57.98 | 48.25 |
| TraesCS2D01G253000.1 | Wheat | extracellular | 65.55 | 45.09 |
| TraesCS2B01G272100.1 | Wheat | extracellular | 65.55 | 45.09 |
| TraesCS2A01G252300.1 | Wheat | extracellular | 65.55 | 45.09 |
| OQU88437 | Sorghum | extracellular | 64.71 | 43.75 |
| Zm00001d007864_P001 | Maize | extracellular | 63.87 | 42.94 |
| VIT_10s0003g04340.t01 | Wine grape | plasma membrane | 73.11 | 42.03 |
| AT4G05430.3 | Thale cress | extracellular, plasma membrane | 58.82 | 41.67 |
| PGSC0003DMT400034582 | Potato | extracellular | 32.77 | 33.62 |
| PGSC0003DMT400015724 | Potato | extracellular | 31.09 | 32.46 |
| PGSC0003DMT400045877 | Potato | extracellular | 28.57 | 31.78 |
| PGSC0003DMT400011608 | Potato | mitochondrion | 36.97 | 23.4 |
| PGSC0003DMT400063348 | Potato | extracellular | 32.77 | 21.08 |
| PGSC0003DMT400080365 | Potato | endoplasmic reticulum, extracellular | 36.13 | 21.08 |
| PGSC0003DMT400044716 | Potato | extracellular | 42.86 | 20.9 |
| PGSC0003DMT400003054 | Potato | extracellular | 32.77 | 20.42 |
| PGSC0003DMT400072939 | Potato | extracellular | 31.93 | 18.45 |
| PGSC0003DMT400047134 | Potato | extracellular, golgi, vacuole | 45.38 | 14.92 |
| PGSC0003DMT400025000 | Potato | nucleus | 32.77 | 14.03 |
| PGSC0003DMT400024290 | Potato | extracellular, vacuole | 38.66 | 13.29 |
| PGSC0003DMT400038538 | Potato | plasma membrane, vacuole | 36.13 | 10.89 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400059279 | EnsemblPlantsGene:PGSC0003DMG400023031 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF98 | PFAM:PF07983 |
| PGSC:PGSC0003DMG400023031 | SMART:SM00768 | UniParc:UPI000295BE57 | UniProt:M1C420 | MapMan:35.1 | : |
Description
Hydrolase, hydrolyzing O-glycosyl compounds [Source:PGSC_GENE;Acc:PGSC0003DMG400023031]
Coordinates
chr4:-:56546570..56546929
Molecular Weight (calculated)
12769.1 Da
IEP (calculated)
4.900
GRAVY (calculated)
-0.071
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQEKEDATI PITTLSPPEG NTTFLGGTTW CVARAGARQF DLQSALDWAC GLGMADCRPI QTGGPCFEPN TLLSHASFAF NTYYQQNGNS DIACNFGGTA
101: MLTKINPSKH LFGLSLYLA
101: MLTKINPSKH LFGLSLYLA
001: MRTQFWIFLL FLLLLNFFSQ AARPVMTIRP ESLVGPQGNT TFLEGTTWCV ARPGATQAEL QRALDWACGI GRVDCSVIER HGDCYEPDTI VSHASFAFNA
101: YYQTNGNNRI ACYFGGTATF TKINPSK
101: YYQTNGNNRI ACYFGGTATF TKINPSK
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:TAIR;Acc:AT4G05430]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.