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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, secretory
BaCelLo:secretory
MultiLoc:cytosol
PProwler:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY02987 Canola extracellular 87.76 80.12
CDY51213 Canola extracellular 87.76 80.12
AT2G03505.1 Thale cress extracellular 82.99 72.62
CDY16114 Canola extracellular 67.35 55.31
CDY33795 Canola extracellular 67.35 55.31
CDY16115 Canola extracellular 57.14 54.19
CDX96880 Canola extracellular 63.27 54.07
CDY34558 Canola extracellular 62.59 53.49
CDX98134 Canola extracellular 65.99 50.79
CDY36415 Canola extracellular 65.31 48.98
PGSC0003DMT400045877 Potato extracellular 31.97 43.93
KRG89485 Soybean extracellular 45.58 38.07
KRH50525 Soybean extracellular 46.26 37.16
KRH75030 Soybean extracellular 51.7 35.35
VIT_01s0011g00570.t01 Wine grape extracellular 44.9 34.2
KRH70882 Soybean extracellular 49.66 33.64
GSMUA_Achr4P23440_001 Banana cytosol 32.65 32.0
HORVU4Hr1G028360.1 Barley peroxisome, plastid 27.21 31.75
CDY26741 Canola extracellular 40.14 31.72
CDX83826 Canola extracellular 38.78 30.98
CDX96707 Canola extracellular 38.78 30.81
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 41.5 30.81
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 42.18 30.24
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 40.82 30.0
TraesCS5A01G393200.1 Wheat extracellular 34.01 29.94
CDY19232 Canola extracellular 38.1 29.79
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 38.78 29.69
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 39.46 29.59
EER97492 Sorghum extracellular 38.78 29.38
Os07t0600700-01 Rice extracellular 38.78 29.38
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 38.1 29.32
GSMUA_Achr7P26650_001 Banana extracellular 23.13 29.31
TraesCS5B01G398000.1 Wheat extracellular 32.65 29.27
TraesCS5B01G399400.1 Wheat extracellular 31.29 29.11
GSMUA_Achr5P08900_001 Banana extracellular 37.41 28.95
TraesCS5D01G403000.1 Wheat extracellular 32.65 28.92
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 35.37 28.89
CDX87201 Canola extracellular 38.78 28.64
CDY16822 Canola extracellular 38.78 28.64
Os03t0756300-01 Rice extracellular 33.33 28.0
CDY04273 Canola extracellular 41.5 27.98
CDY07353 Canola extracellular 41.5 27.98
CDY23085 Canola extracellular, plasma membrane, vacuole 36.73 27.98
GSMUA_Achr9P07140_001 Banana extracellular 35.37 27.96
TraesCS6D01G099100.1 Wheat endoplasmic reticulum, extracellular, vacuole 36.05 27.89
GSMUA_Achr8P28170_001 Banana extracellular 29.25 27.74
CDY42854 Canola extracellular 36.73 27.69
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 37.41 27.64
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 37.41 27.64
CDY02169 Canola extracellular 36.05 27.32
CDX69983 Canola extracellular 38.78 26.89
CDY65205 Canola plasma membrane 36.05 26.77
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 34.01 26.6
CDY56715 Canola cytosol 20.41 26.55
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 35.37 26.4
TraesCS6A01G110400.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.37 26.4
TraesCS6B01G138700.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.37 26.26
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 35.37 26.26
Os01t0763900-01 Rice extracellular 36.73 26.09
TraesCS3D01G299600.1 Wheat extracellular 34.69 26.02
TraesCS3A01G302400.1 Wheat extracellular 34.01 25.51
CDY54140 Canola extracellular 36.05 25.36
CDY47357 Canola endoplasmic reticulum, extracellular 31.97 25.13
CDY50312 Canola extracellular 36.73 25.12
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 31.97 25.0
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 40.14 24.89
CDY21992 Canola cytosol 23.81 24.65
CDY48582 Canola cytosol 23.81 24.65
Zm00001d029539_P001 Maize endoplasmic reticulum, extracellular, vacuole 33.33 24.5
Zm00001d047293_P001 Maize endoplasmic reticulum, extracellular, vacuole 32.65 24.49
OQU87600 Sorghum extracellular 31.29 24.47
CDX74636 Canola extracellular 19.73 24.37
CDY47296 Canola extracellular 19.73 24.37
CDY01142 Canola extracellular 31.29 24.34
CDX99038 Canola extracellular 38.78 24.26
TraesCS1A01G332500.1 Wheat extracellular 33.33 23.45
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 33.33 23.22
TraesCS1D01G335200.1 Wheat endoplasmic reticulum, extracellular, vacuole 34.01 23.04
TraesCS1B01G346200.2 Wheat endoplasmic reticulum, extracellular, vacuole 32.65 22.97
Solyc04g005420.2.1 Tomato extracellular, vacuole 46.94 22.48
Zm00001d013250_P003 Maize extracellular 34.01 22.32
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 36.05 21.81
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 32.65 21.24
Os05t0512600-01 Rice extracellular 32.65 21.05
CDX79873 Canola endoplasmic reticulum, extracellular, plasma membrane 25.17 20.67
Zm00001d010728_P005 Maize extracellular 30.61 20.55
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 34.01 20.49
HORVU2Hr1G033470.1 Barley cytosol, plastid 40.82 20.2
CDX98264 Canola endoplasmic reticulum, extracellular, plasma membrane 23.13 20.0
CDY70929 Canola extracellular 24.49 20.0
EES18492 Sorghum extracellular 30.61 19.65
HORVU5Hr1G096090.6 Barley plastid 30.61 19.23
CDY56240 Canola extracellular 22.45 19.08
KXG37528 Sorghum mitochondrion 34.01 18.87
Zm00001d038682_P001 Maize extracellular 29.25 18.7
CDY05067 Canola endoplasmic reticulum, extracellular 15.65 18.55
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 34.69 18.55
CDX90730 Canola endoplasmic reticulum, extracellular 15.65 18.4
HORVU3Hr1G074010.3 Barley cytosol, plastid 34.69 17.53
CDY72034 Canola endoplasmic reticulum, extracellular 14.29 17.36
TraesCS5A01G548300.1 Wheat plasma membrane 23.13 17.35
CDY29629 Canola extracellular 26.53 17.03
CDX97778 Canola extracellular 25.85 16.59
CDY47016 Canola extracellular 37.41 14.78
CDX99818 Canola extracellular 27.89 13.9
CDX94970 Canola plastid 27.21 13.51
CDY43335 Canola extracellular 26.53 13.22
CDY48334 Canola vacuole 27.89 13.06
CDY64750 Canola endoplasmic reticulum, vacuole 26.53 12.96
CDX90189 Canola extracellular 26.53 12.42
CDY31085 Canola plastid 27.21 11.4
CDY32184 Canola vacuole 27.21 11.33
CDY56795 Canola cytosol, nucleus, plastid, vacuole 19.73 9.27
CDX87377 Canola endoplasmic reticulum, extracellular, vacuole 20.41 7.79
CDX88545 Canola endoplasmic reticulum, extracellular, vacuole 20.41 7.71
CDY37850 Canola vacuole 19.73 7.63
CDY43577 Canola vacuole 19.73 7.59
Protein Annotations
EnsemblPlants:CDY65418EnsemblPlantsGene:GSBRNA2T00046546001InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF147PFAM:PF07983
ProteinID:CDY65418ProteinID:CDY65418.1SEG:segSMART:SM00768UniParc:UPI0004EDF406UniProt:A0A078JCR0
MapMan:35.1:::::
Description
BnaC02g48000DBnaC02g48000D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JCR0]
Coordinates
chrLK034776:-:22052..22850
Molecular Weight (calculated)
15185.7 Da
IEP (calculated)
4.857
GRAVY (calculated)
-0.148
Length
147 amino acids
Sequence
(BLAST)
001: ATYCLCRDGV GEKDLQTSID YACGVLGDCN PIHEKGPCYQ PNNVKGHCDW AVNSYFQRSG QLPGSCNFSG IATTSPNPPS TVVTGCIYPS SPGSTGTTTT
101: TRPPGTPTFP GPPAFGPTGG FDPSGNDALS LFTSIALTLG FVVIAFQ
Best Arabidopsis Sequence Match ( AT2G03505.4 )
(BLAST)
001: MRLLLSLLFL LALTTYSSAT YCLCRDGVGE KDLQTSIDYA CGVLKDCNPI HEKGPCYQPN TIKSHCDWAV NTYFQRFGQI SGSCNFSGTA TTSQNLPSTV
101: VTGCLYPSSP GSAGTTPTTG TPSGTQTFPG PPAFGPAGDF DPSGNNGAPS LFISIALSLG FSVVIAFL
Arabidopsis Description
At2g03505 [Source:UniProtKB/TrEMBL;Acc:Q6NPI4]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.