Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 6
- vacuole 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05067 | Canola | endoplasmic reticulum, extracellular | 91.2 | 91.94 |
| CDY72034 | Canola | endoplasmic reticulum, extracellular | 84.0 | 86.78 |
| KRH51177 | Soybean | extracellular | 44.0 | 47.41 |
| CDX74636 | Canola | extracellular | 42.4 | 44.54 |
| GSMUA_Achr11P... | Banana | extracellular | 42.4 | 44.54 |
| Solyc11g012580.1.1 | Tomato | extracellular | 41.6 | 44.44 |
| KRH14105 | Soybean | extracellular | 41.6 | 44.07 |
| PGSC0003DMT400034582 | Potato | extracellular | 40.8 | 43.97 |
| CDY47296 | Canola | extracellular | 41.6 | 43.7 |
| PGSC0003DMT400015724 | Potato | extracellular | 39.2 | 42.98 |
| Solyc07g047710.2.1 | Tomato | extracellular | 39.2 | 42.98 |
| VIT_12s0057g00700.t01 | Wine grape | extracellular | 40.0 | 42.73 |
| KRH74013 | Soybean | extracellular | 40.0 | 42.37 |
| AT2G04910.1 | Thale cress | extracellular | 40.8 | 41.13 |
| GSMUA_Achr9P09230_001 | Banana | extracellular | 39.2 | 40.5 |
| TraesCS5B01G395600.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 38.4 | 35.04 |
| TraesCS5D01G400600.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 36.8 | 33.09 |
| CDY56715 | Canola | cytosol | 29.6 | 32.74 |
| TraesCS5A01G390800.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 34.4 | 30.94 |
| HORVU5Hr1G095450.3 | Barley | extracellular | 32.0 | 30.08 |
| CDY48582 | Canola | cytosol | 30.4 | 26.76 |
| CDY21992 | Canola | cytosol | 30.4 | 26.76 |
| CDX98264 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 30.4 | 22.35 |
| CDY01142 | Canola | extracellular | 32.8 | 21.69 |
| CDY47357 | Canola | endoplasmic reticulum, extracellular | 32.0 | 21.39 |
| CDY56240 | Canola | extracellular | 29.6 | 21.39 |
| CDX79873 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 30.4 | 21.23 |
| CDY70929 | Canola | extracellular | 28.8 | 20.0 |
| CDY16115 | Canola | extracellular | 24.0 | 19.35 |
| CDY29629 | Canola | extracellular | 35.2 | 19.21 |
| CDX97778 | Canola | extracellular | 35.2 | 19.21 |
| CDX83826 | Canola | extracellular | 27.2 | 18.48 |
| CDX96707 | Canola | extracellular | 27.2 | 18.38 |
| CDY16822 | Canola | extracellular | 28.8 | 18.09 |
| CDX87201 | Canola | extracellular | 28.8 | 18.09 |
| CDY65205 | Canola | plasma membrane | 28.0 | 17.68 |
| CDY23085 | Canola | extracellular, plasma membrane, vacuole | 27.2 | 17.62 |
| CDY02169 | Canola | extracellular | 27.2 | 17.53 |
| CDY54140 | Canola | extracellular | 28.8 | 17.22 |
| CDY26741 | Canola | extracellular | 25.6 | 17.2 |
| CDY19232 | Canola | extracellular | 25.6 | 17.02 |
| CDY42854 | Canola | extracellular | 26.4 | 16.92 |
| CDY40247 | Canola | endoplasmic reticulum, extracellular, vacuole | 26.4 | 16.84 |
| CDY51213 | Canola | extracellular | 21.6 | 16.77 |
| CDY50312 | Canola | extracellular | 28.8 | 16.74 |
| CDY04273 | Canola | extracellular | 28.8 | 16.51 |
| CDY07353 | Canola | extracellular | 28.8 | 16.51 |
| CDY33795 | Canola | extracellular | 23.2 | 16.2 |
| CDY16114 | Canola | extracellular | 23.2 | 16.2 |
| CDY02987 | Canola | extracellular | 20.8 | 16.15 |
| CDX69983 | Canola | extracellular | 27.2 | 16.04 |
| CDY65418 | Canola | cytosol | 18.4 | 15.65 |
| CDY40909 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 29.6 | 15.61 |
| CDY43335 | Canola | extracellular | 36.8 | 15.59 |
| CDX94970 | Canola | plastid | 36.8 | 15.54 |
| CDY64750 | Canola | endoplasmic reticulum, vacuole | 36.8 | 15.28 |
| CDX98134 | Canola | extracellular | 23.2 | 15.18 |
| CDX96880 | Canola | extracellular | 20.8 | 15.12 |
| CDY34558 | Canola | extracellular | 20.8 | 15.12 |
| CDX99818 | Canola | extracellular | 35.2 | 14.92 |
| CDX99038 | Canola | extracellular | 28.0 | 14.89 |
| CDY36415 | Canola | extracellular | 23.2 | 14.8 |
| CDX90189 | Canola | extracellular | 36.8 | 14.65 |
| CDY48334 | Canola | vacuole | 36.0 | 14.33 |
| CDY56795 | Canola | cytosol, nucleus, plastid, vacuole | 32.0 | 12.78 |
| CDY31085 | Canola | plastid | 35.2 | 12.54 |
| CDY32184 | Canola | vacuole | 35.2 | 12.46 |
| CDX87377 | Canola | endoplasmic reticulum, extracellular, vacuole | 32.0 | 10.39 |
| CDX88545 | Canola | endoplasmic reticulum, extracellular, vacuole | 32.0 | 10.28 |
| CDY37850 | Canola | vacuole | 30.4 | 10.0 |
| CDY43577 | Canola | vacuole | 30.4 | 9.95 |
| CDY47016 | Canola | extracellular | 26.4 | 8.87 |
Protein Annotations
| EnsemblPlants:CDX90730 | EnsemblPlantsGene:GSBRNA2T00151418001 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF237 | PFAM:PF07983 |
| ProteinID:CDX90730 | ProteinID:CDX90730.1 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 | TMHMM:TMhelix |
| UniParc:UPI0004EE74D3 | MapMan:35.1 | : | : | : | : |
Description
BnaA03g24100D
Coordinates
chrLK031864:-:219035..220931
Molecular Weight (calculated)
13543.9 Da
IEP (calculated)
7.370
GRAVY (calculated)
-0.194
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIKNSFSLL LSSLMVFALI AIPTISGQPS GTTWCVANPK AQDPVVQAAL GWACQQSEAY CSRIQRGQNC YSPNTLRDHA SVVFNTYYQH NKNQAGSCDF
101: NSAAVITHTD PSHDTCQFES VPGSK
101: NSAAVITHTD PSHDTCQFES VPGSK
001: MGYLIFVAKA EFGQWCVADG QIPDNVIQAA VDWACQTGGA DCSTIQPNQP CFLPNTVKDH ASVVFNNYYQ RYKRNGGSCN FNSTAFITQT DPSHDSCHFE
101: YVPF
101: YVPF
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SI35]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.