Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- golgi 5
- plasma membrane 6
- endoplasmic reticulum 6
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400034582 | Potato | extracellular | 88.03 | 88.79 |
| KRH51177 | Soybean | extracellular | 61.54 | 62.07 |
| AT5G35740.1 | Thale cress | extracellular | 54.7 | 53.78 |
| CDY47296 | Canola | extracellular | 54.7 | 53.78 |
| Bra035382.1-P | Field mustard | extracellular | 53.85 | 52.94 |
| CDX74636 | Canola | extracellular | 53.85 | 52.94 |
| Solyc07g047710.2.1 | Tomato | extracellular | 51.28 | 52.63 |
| GSMUA_Achr11P... | Banana | extracellular | 52.14 | 51.26 |
| GSMUA_Achr9P09230_001 | Banana | extracellular | 50.43 | 48.76 |
| TraesCS5D01G400600.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 51.28 | 43.17 |
| TraesCS5B01G395600.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 50.43 | 43.07 |
| CDX90730 | Canola | endoplasmic reticulum, extracellular | 44.44 | 41.6 |
| CDY05067 | Canola | endoplasmic reticulum, extracellular | 43.59 | 41.13 |
| TraesCS5A01G390800.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 48.72 | 41.01 |
| HORVU5Hr1G095450.3 | Barley | extracellular | 44.44 | 39.1 |
| CDY72034 | Canola | endoplasmic reticulum, extracellular | 40.17 | 38.84 |
| AT2G04910.1 | Thale cress | extracellular | 41.03 | 38.71 |
| Solyc04g058080.2.1 | Tomato | extracellular | 38.46 | 25.28 |
| Solyc03g115200.2.1 | Tomato | extracellular | 34.19 | 21.39 |
| Solyc09g091920.2.1 | Tomato | endoplasmic reticulum, extracellular | 34.19 | 20.3 |
| Solyc05g012380.2.1 | Tomato | extracellular | 34.19 | 19.8 |
| Solyc12g098410.1.1 | Tomato | endoplasmic reticulum, extracellular | 32.48 | 19.19 |
| Solyc01g010310.2.1 | Tomato | extracellular | 29.91 | 18.52 |
| Solyc07g053430.2.1 | Tomato | endoplasmic reticulum, extracellular | 35.04 | 18.22 |
| Solyc07g056310.2.1 | Tomato | extracellular | 36.75 | 17.41 |
| Solyc05g016390.2.1 | Tomato | endoplasmic reticulum, extracellular | 37.61 | 17.05 |
| Solyc12g017360.1.1 | Tomato | cytosol, peroxisome, plastid | 33.33 | 13.22 |
| Solyc02g071200.2.1 | Tomato | extracellular | 34.19 | 13.2 |
| Solyc04g005420.2.1 | Tomato | extracellular, vacuole | 30.77 | 11.73 |
| Solyc01g101120.2.1 | Tomato | endoplasmic reticulum, golgi | 35.9 | 11.44 |
Protein Annotations
| MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 |
| GO:GO:0046658 | UniProt:K4D662 | PFAM:PF07983 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF98 | SMART:SM00768 |
| SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc11g012580.1 | EnsemblPlants:Solyc11g012580.1.1 | UniParc:UPI000276A0F9 | InterPro:X8 | : |
Description
No Description!
Coordinates
chr11:+:5379368..5380451
Molecular Weight (calculated)
13275.7 Da
IEP (calculated)
6.069
GRAVY (calculated)
-0.253
Length
117 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSRYLHIL IVLIFFSIIP FKSEGQFHDW CIADEQTPDD ELVQALKWAC ENGANCTKIQ ENQPCYLPNT VRGHASYAFN SYYQNMKQKG ASCYFNSAAI
101: LTAKDPSHDA CKFEVIP
101: LTAKDPSHDA CKFEVIP
001: MSTFLIRILL PLLIIAMTLP RRSEAESEQW CIADEQTPDD ELQAALDWAC GKGGADCSKM QQENQPCFLP NTIRDHASFA FNSYYQTYKN KGGSCYFKGA
101: AMITELDPSH GSCQYEYNP
101: AMITELDPSH GSCQYEYNP
Arabidopsis Description
At5g35740 [Source:UniProtKB/TrEMBL;Acc:Q9FKH4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.