Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- vacuole 5
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47296 | Canola | extracellular | 86.55 | 86.55 |
| CDX74636 | Canola | extracellular | 86.55 | 86.55 |
| Bra035382.1-P | Field mustard | extracellular | 86.55 | 86.55 |
| VIT_12s0057g00700.t01 | Wine grape | extracellular | 68.07 | 69.23 |
| KRH14105 | Soybean | extracellular | 67.23 | 67.8 |
| KRH74013 | Soybean | extracellular | 65.55 | 66.1 |
| KRH51177 | Soybean | extracellular | 63.03 | 64.66 |
| PGSC0003DMT400015724 | Potato | extracellular | 58.82 | 61.4 |
| Solyc07g047710.2.1 | Tomato | extracellular | 57.14 | 59.65 |
| GSMUA_Achr11P... | Banana | extracellular | 57.98 | 57.98 |
| GSMUA_Achr9P09230_001 | Banana | extracellular | 57.98 | 57.02 |
| Solyc11g012580.1.1 | Tomato | extracellular | 53.78 | 54.7 |
| PGSC0003DMT400034582 | Potato | extracellular | 52.94 | 54.31 |
| TraesCS5B01G395600.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 56.3 | 48.91 |
| TraesCS5D01G400600.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 56.3 | 48.2 |
| AT2G04910.1 | Thale cress | extracellular | 48.74 | 46.77 |
| TraesCS5A01G390800.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 53.78 | 46.04 |
| HORVU5Hr1G095450.3 | Barley | extracellular | 48.74 | 43.61 |
| AT4G05430.3 | Thale cress | extracellular, plasma membrane | 39.5 | 27.98 |
| AT2G30933.1 | Thale cress | extracellular | 42.02 | 22.03 |
| AT1G18650.1 | Thale cress | extracellular | 33.61 | 21.74 |
| AT4G13600.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 42.02 | 21.64 |
| AT1G26450.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 33.61 | 20.3 |
| AT2G03505.1 | Thale cress | extracellular | 28.57 | 20.24 |
| AT5G61130.1 | Thale cress | extracellular | 33.61 | 19.9 |
| AT1G69295.1 | Thale cress | extracellular | 34.45 | 18.47 |
| AT1G29380.1 | Thale cress | extracellular | 43.7 | 16.51 |
| AT5G08000.2 | Thale cress | extracellular | 29.41 | 16.43 |
| AT1G13830.2 | Thale cress | mitochondrion, peroxisome, plastid, vacuole | 28.57 | 16.11 |
| AT3G58100.2 | Thale cress | cytosol | 34.45 | 16.02 |
| AT1G09460.1 | Thale cress | extracellular, vacuole | 37.82 | 13.64 |
| AT1G79480.1 | Thale cress | extracellular | 41.18 | 12.34 |
| AT5G67460.1 | Thale cress | vacuole | 34.45 | 10.79 |
Protein Annotations
| MapMan:35.1 | EntrezGene:833551 | UniProt:A0A178U7T5 | ProteinID:AED94013.1 | ArrayExpress:AT5G35740 | EnsemblPlantsGene:AT5G35740 |
| RefSeq:AT5G35740 | TAIR:AT5G35740 | RefSeq:AT5G35740-TAIR-G | EnsemblPlants:AT5G35740.1 | TAIR:AT5G35740.1 | EMBL:AY084803 |
| ProteinID:BAB09273.1 | EMBL:BT024725 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016787 |
| GO:GO:0030246 | GO:GO:0030247 | GO:GO:0046658 | RefSeq:NP_198423.1 | ProteinID:OAO89998.1 | PFAM:PF07983 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR32227 |
| PANTHER:PTHR32227:SF118 | UniProt:Q9FKH4 | SMART:SM00768 | SignalP:SignalP-noTM | UniParc:UPI0000048BBD | InterPro:X8 |
| SEG:seg | : | : | : | : | : |
Description
At5g35740 [Source:UniProtKB/TrEMBL;Acc:Q9FKH4]
Coordinates
chr5:-:13910312..13911225
Molecular Weight (calculated)
13398.8 Da
IEP (calculated)
4.467
GRAVY (calculated)
-0.429
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTFLIRILL PLLIIAMTLP RRSEAESEQW CIADEQTPDD ELQAALDWAC GKGGADCSKM QQENQPCFLP NTIRDHASFA FNSYYQTYKN KGGSCYFKGA
101: AMITELDPSH GSCQYEYNP
101: AMITELDPSH GSCQYEYNP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.