Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01142 | Canola | extracellular | 68.4 | 83.6 |
| CDY47357 | Canola | endoplasmic reticulum, extracellular | 64.94 | 80.21 |
| Bra032719.1-P | Field mustard | endoplasmic reticulum, extracellular | 62.34 | 69.57 |
| KRH42801 | Soybean | extracellular | 40.69 | 48.96 |
| KRH58889 | Soybean | endoplasmic reticulum, extracellular | 39.39 | 47.64 |
| Solyc09g091920.2.1 | Tomato | endoplasmic reticulum, extracellular | 38.96 | 45.69 |
| PGSC0003DMT400080365 | Potato | endoplasmic reticulum, extracellular | 39.83 | 45.1 |
| Zm00001d050544_P001 | Maize | extracellular | 35.06 | 43.32 |
| GSMUA_Achr6P27540_001 | Banana | extracellular | 34.2 | 42.93 |
| Zm00001d016545_P001 | Maize | extracellular | 34.63 | 42.78 |
| AT5G35740.1 | Thale cress | extracellular | 21.64 | 42.02 |
| EES05109 | Sorghum | extracellular, plasma membrane | 34.63 | 41.67 |
| GSMUA_Achr3P16040_001 | Banana | mitochondrion | 24.68 | 40.71 |
| VIT_05s0029g00190.t01 | Wine grape | extracellular | 38.53 | 40.45 |
| TraesCS5D01G467200.1 | Wheat | extracellular, plasma membrane | 31.17 | 39.56 |
| TraesCS5A01G456400.1 | Wheat | extracellular, plasma membrane | 30.74 | 39.01 |
| TraesCS5B01G465400.1 | Wheat | extracellular, plasma membrane | 30.74 | 39.01 |
| PGSC0003DMT400011608 | Potato | mitochondrion | 31.6 | 38.83 |
| AT2G04910.1 | Thale cress | extracellular | 20.35 | 37.9 |
| Solyc12g098410.1.1 | Tomato | endoplasmic reticulum, extracellular | 31.6 | 36.87 |
| GSMUA_Achr9P07170_001 | Banana | extracellular | 26.41 | 34.08 |
| AT1G18650.1 | Thale cress | extracellular | 26.41 | 33.15 |
| AT5G61130.1 | Thale cress | extracellular | 28.14 | 32.34 |
| HORVU5Hr1G109550.1 | Barley | cytosol, plastid | 36.36 | 31.34 |
| AT2G03505.1 | Thale cress | extracellular | 22.08 | 30.36 |
| AT1G26450.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 24.24 | 28.43 |
| AT4G05430.3 | Thale cress | extracellular, plasma membrane | 20.35 | 27.98 |
| AT5G08000.2 | Thale cress | extracellular | 25.11 | 27.23 |
| AT2G30933.1 | Thale cress | extracellular | 25.54 | 25.99 |
| AT1G69295.1 | Thale cress | extracellular | 23.38 | 24.32 |
| AT1G13830.2 | Thale cress | mitochondrion, peroxisome, plastid, vacuole | 21.21 | 23.22 |
| AT1G29380.1 | Thale cress | extracellular | 25.54 | 18.73 |
| AT3G58100.2 | Thale cress | cytosol | 17.75 | 16.02 |
| AT1G09460.1 | Thale cress | extracellular, vacuole | 21.21 | 14.85 |
| AT5G67460.1 | Thale cress | vacuole | 20.35 | 12.37 |
| AT1G79480.1 | Thale cress | extracellular | 19.91 | 11.59 |
Protein Annotations
| MapMan:35.2 | EntrezGene:826993 | ProteinID:AEE83301.1 | ArrayExpress:AT4G13600 | EnsemblPlantsGene:AT4G13600 | RefSeq:AT4G13600 |
| TAIR:AT4G13600 | RefSeq:AT4G13600-TAIR-G | EnsemblPlants:AT4G13600.1 | TAIR:AT4G13600.1 | UniProt:F4JT39 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 | GO:GO:0046658 | RefSeq:NP_193096.5 |
| PFAM:PF07983 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR32227 |
| PANTHER:PTHR32227:SF147 | SMART:SM00768 | TMHMM:TMhelix | UniParc:UPI0001A7B0B1 | InterPro:X8 | SEG:seg |
Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JT39]
Coordinates
chr4:-:7911019..7912892
Molecular Weight (calculated)
24601.4 Da
IEP (calculated)
9.491
GRAVY (calculated)
0.019
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRKEKTKQK QKRVREVRLH TQTLHSHSFL SFLSYHFPMA LCLQTLSFLL LLLFRSSAAM WCVARFDVTS QALQAALDYA CAAGADCAPI QPNGLCFLPN
101: TVQAHASYAF NSYFQRAAMA PGSCNFAGTS TIAKTDPSYG SCVYPNSVRN AGGSASTTTV GGTPSTTVGN SPMTTLRPPS GTTTSPFGIG GGGLNPQGTT
201: TTTNTDESGS YIINKSTVSI ALFVALLLWF I
101: TVQAHASYAF NSYFQRAAMA PGSCNFAGTS TIAKTDPSYG SCVYPNSVRN AGGSASTTTV GGTPSTTVGN SPMTTLRPPS GTTTSPFGIG GGGLNPQGTT
201: TTTNTDESGS YIINKSTVSI ALFVALLLWF I
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.