Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g091920.2.1 | Tomato | endoplasmic reticulum, extracellular | 45.0 | 50.25 |
| KRH58889 | Soybean | endoplasmic reticulum, extracellular | 43.18 | 49.74 |
| KRH42801 | Soybean | extracellular | 43.18 | 49.48 |
| GSMUA_Achr3P16040_001 | Banana | mitochondrion | 30.45 | 47.86 |
| PGSC0003DMT400080365 | Potato | endoplasmic reticulum, extracellular | 44.09 | 47.55 |
| CDY01142 | Canola | extracellular | 40.0 | 46.56 |
| Zm00001d050544_P001 | Maize | extracellular | 38.64 | 45.45 |
| CDY47357 | Canola | endoplasmic reticulum, extracellular | 38.64 | 45.45 |
| Zm00001d016545_P001 | Maize | extracellular | 38.18 | 44.92 |
| EES05109 | Sorghum | extracellular, plasma membrane | 38.64 | 44.27 |
| GSMUA_Achr6P27540_001 | Banana | extracellular | 35.0 | 41.85 |
| TraesCS5B01G465400.1 | Wheat | extracellular, plasma membrane | 32.73 | 39.56 |
| TraesCS5D01G467200.1 | Wheat | extracellular, plasma membrane | 32.73 | 39.56 |
| TraesCS5A01G456400.1 | Wheat | extracellular, plasma membrane | 32.73 | 39.56 |
| PGSC0003DMT400011608 | Potato | mitochondrion | 33.64 | 39.36 |
| AT4G13600.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 40.45 | 38.53 |
| VIT_12s0057g00700.t01 | Wine grape | extracellular | 20.45 | 38.46 |
| Bra032719.1-P | Field mustard | endoplasmic reticulum, extracellular | 35.91 | 38.16 |
| Solyc12g098410.1.1 | Tomato | endoplasmic reticulum, extracellular | 34.09 | 37.88 |
| VIT_17s0000g07260.t01 | Wine grape | extracellular | 33.18 | 35.27 |
| GSMUA_Achr9P07170_001 | Banana | extracellular | 28.64 | 35.2 |
| VIT_01s0011g00570.t01 | Wine grape | extracellular | 30.45 | 34.72 |
| VIT_12s0028g02540.t01 | Wine grape | extracellular | 24.09 | 30.46 |
| VIT_10s0003g02720.t01 | Wine grape | plastid | 26.82 | 30.26 |
| HORVU5Hr1G109550.1 | Barley | cytosol, plastid | 35.91 | 29.48 |
| VIT_10s0003g04340.t01 | Wine grape | plasma membrane | 26.82 | 28.5 |
| VIT_12s0028g00050.t01 | Wine grape | extracellular | 27.73 | 25.42 |
| VIT_03s0017g02240.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 24.55 | 21.34 |
| VIT_19s0085g00810.t01 | Wine grape | golgi, vacuole | 23.18 | 13.86 |
| VIT_07s0129g00230.t01 | Wine grape | vacuole | 22.73 | 12.11 |
| VIT_14s0060g00440.t01 | Wine grape | vacuole | 33.18 | 11.87 |
| VIT_09s0002g06500.t01 | Wine grape | cytosol, peroxisome, plastid | 9.09 | 5.42 |
Protein Annotations
| EntrezGene:100260517 | wikigene:100260517 | MapMan:35.1 | ProteinID:CBI17309 | ProteinID:CBI17309.3 | UniProt:D7SNT0 |
| EMBL:FN594958 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0030246 |
| GO:GO:0030247 | GO:GO:0046658 | EntrezGene:LOC100260517 | wikigene:LOC100260517 | PFAM:PF07983 | PANTHER:PTHR32227 |
| PANTHER:PTHR32227:SF147 | SMART:SM00768 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00015CC0BD | ArrayExpress:VIT_05s0029g00190 |
| EnsemblPlantsGene:VIT_05s0029g00190 | EnsemblPlants:VIT_05s0029g00190.t01 | unigene:Vvi.19446 | InterPro:X8 | RefSeq:XP_002267551 | RefSeq:XP_002267551.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5:+:14513409..14516911
Molecular Weight (calculated)
22232.7 Da
IEP (calculated)
6.465
GRAVY (calculated)
0.389
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALAKVVAI MIASMAILAT VAGGATPVIG PTPVVGGGTT QIPAEGGASW CVARSDASEQ GLQTALDYAC GSGADCTPIQ TSGLCYLPNT LQAHASYAFN
101: SFFQRKSMAP GSCDFAGTAN IARTDPSYGS CVYPSSLSTA GGMSTPASTP STPGVIYPPP SPISSTPLAG ISGGYNPGLG PTVPTTNNSV TSMKLSVFSI
201: LMHISFFLAL LFTFQPMLVF
101: SFFQRKSMAP GSCDFAGTAN IARTDPSYGS CVYPSSLSTA GGMSTPASTP STPGVIYPPP SPISSTPLAG ISGGYNPGLG PTVPTTNNSV TSMKLSVFSI
201: LMHISFFLAL LFTFQPMLVF
001: MKRKEKTKQK QKRVREVRLH TQTLHSHSFL SFLSYHFPMA LCLQTLSFLL LLLFRSSAAM WCVARFDVTS QALQAALDYA CAAGADCAPI QPNGLCFLPN
101: TVQAHASYAF NSYFQRAAMA PGSCNFAGTS TIAKTDPSYG SCVYPNSVRN AGGSASTTTV GGTPSTTVGN SPMTTLRPPS GTTTSPFGIG GGGLNPQGTT
201: TTTNTDESGS YIINKSTVSI ALFVALLLWF I
101: TVQAHASYAF NSYFQRAAMA PGSCNFAGTS TIAKTDPSYG SCVYPNSVRN AGGSASTTTV GGTPSTTVGN SPMTTLRPPS GTTTSPFGIG GGGLNPQGTT
201: TTTNTDESGS YIINKSTVSI ALFVALLLWF I
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JT39]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.