Factsheet for AT1G18650.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 7
vacuole 4
plasma membrane 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96707	Canola	extracellular	85.87	85.41
CDX83826	Canola	extracellular	84.78	84.78
CDY26741	Canola	extracellular	83.7	82.8
CDY19232	Canola	extracellular	84.24	82.45
KRH54678	Soybean	extracellular, nucleus	41.85	69.37
VIT_17s0000g07260.t01	Wine grape	extracellular	61.41	54.59
AT5G61130.1	Thale cress	extracellular	57.07	52.24
Solyc03g115200.2.1	Tomato	extracellular	52.72	51.87
PGSC0003DMT400063348	Potato	extracellular	51.63	51.35
KRH03122	Soybean	extracellular, nucleus	53.8	48.77
GSMUA_Achr4P23440_001	Banana	cytosol	38.59	47.33
GSMUA_Achr9P07140_001	Banana	extracellular	46.2	45.7
GSMUA_Achr4P32790_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	44.02	45.0
GSMUA_Achr7P26650_001	Banana	extracellular	27.72	43.97
GSMUA_Achr1P04440_001	Banana	endoplasmic reticulum, extracellular, vacuole	45.65	43.75
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	45.11	43.46
KRH56823	Soybean	extracellular	49.46	42.72
GSMUA_Achr5P08900_001	Banana	extracellular	43.48	42.11
AT5G08000.2	Thale cress	extracellular	48.37	41.78
GSMUA_Achr8P28170_001	Banana	extracellular	34.78	41.29
TraesCS5B01G398000.1	Wheat	extracellular	35.87	40.24
Os07t0600700-01	Rice	extracellular	42.39	40.21
TraesCS5B01G399400.1	Wheat	extracellular	34.24	39.87
Os03t0756300-01	Rice	extracellular	37.5	39.43
Os03t0421800-01	Rice	endoplasmic reticulum, extracellular, vacuole	40.22	39.36
TraesCS5D01G403000.1	Wheat	extracellular	35.33	39.16
AT2G03505.1	Thale cress	extracellular	35.33	38.69
TraesCS2D01G185800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	40.76	37.88
TraesCS5A01G393200.1	Wheat	extracellular	34.24	37.72
EER97492	Sorghum	extracellular	39.67	37.63
HORVU4Hr1G028360.1	Barley	peroxisome, plastid	25.54	37.3
Zm00001d006776_P001	Maize	endoplasmic reticulum, extracellular, vacuole	40.22	37.19
Zm00001d006777_P003	Maize	endoplasmic reticulum, extracellular, vacuole	40.22	37.19
TraesCS2A01G177600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	40.22	37.0
Zm00001d022059_P001	Maize	endoplasmic reticulum, extracellular	39.67	36.87
TraesCS2B01G204700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	40.76	36.59
TraesCS6B01G138700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	39.13	36.36
Zm00001d043361_P001	Maize	endoplasmic reticulum, extracellular	36.96	36.17
TraesCS6D01G099100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	36.96	35.79
TraesCS6A01G110400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	38.04	35.53
OQU87600	Sorghum	extracellular	35.87	35.11
Os01t0763900-01	Rice	extracellular	39.13	34.78
TraesCS3D01G299600.1	Wheat	extracellular	36.96	34.69
TraesCS3A01G302400.1	Wheat	extracellular	36.96	34.69
AT5G35740.1	Thale cress	extracellular	21.74	33.61
EER92116	Sorghum	endoplasmic reticulum, extracellular, vacuole	35.87	33.5
AT1G26450.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	34.78	32.49
Zm00001d013250_P003	Maize	extracellular	39.13	32.14
GSMUA_Achr4P10810_001	Banana	endoplasmic reticulum, nucleus, plasma membrane	42.39	32.1
Zm00001d047293_P001	Maize	endoplasmic reticulum, extracellular, vacuole	33.7	31.63
HORVU1Hr1G077100.2	Barley	endoplasmic reticulum, extracellular, vacuole	35.87	31.28
TraesCS1A01G332500.1	Wheat	extracellular	35.33	31.1
AT1G69295.1	Thale cress	extracellular	37.5	31.08
TraesCS1B01G346200.2	Wheat	endoplasmic reticulum, extracellular, vacuole	34.78	30.62
Zm00001d029539_P001	Maize	endoplasmic reticulum, extracellular, vacuole	32.61	30.0
TraesCS1D01G335200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	35.33	29.95
AT2G04910.1	Thale cress	extracellular	20.11	29.84
AT4G05430.3	Thale cress	extracellular, plasma membrane	27.17	29.76
Zm00001d034062_P001	Maize	cytosol, golgi, peroxisome	39.13	29.51
Os05t0512600-01	Rice	extracellular	35.87	28.95
AT1G13830.2	Thale cress	mitochondrion, peroxisome, plastid, vacuole	32.61	28.44
KXG37528	Sorghum	mitochondrion	39.67	27.55
HORVU6Hr1G019780.4	Barley	endoplasmic reticulum, extracellular	33.7	27.43
TraesCS5A01G548300.1	Wheat	plasma membrane	28.8	27.04
AT4G13600.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	33.15	26.41
HORVU2Hr1G033470.1	Barley	cytosol, plastid	40.76	25.25
HORVU5Hr1G096090.6	Barley	plastid	32.07	25.21
TraesCS3B01G334200.1	Wheat	golgi, nucleus, plasma membrane	37.5	25.09
EES18492	Sorghum	extracellular	30.98	24.89
Zm00001d038682_P001	Maize	extracellular	30.43	24.35
Zm00001d010728_P005	Maize	extracellular	28.8	24.2
HORVU3Hr1G074010.3	Barley	cytosol, plastid	37.5	23.71
AT2G30933.1	Thale cress	extracellular	28.26	22.91
AT3G58100.2	Thale cress	cytosol	24.46	17.58
AT1G09460.1	Thale cress	extracellular, vacuole	31.52	17.58
AT1G29380.1	Thale cress	extracellular	29.89	17.46
AT5G67460.1	Thale cress	vacuole	24.46	11.84
AT1G79480.1	Thale cress	extracellular	21.2	9.82

Protein Annotations

MapMan:35.1	EntrezGene:838446	ProteinID:AAF98409.1	ProteinID:AEE29739.1	EMBL:AK228238	ArrayExpress:AT1G18650
EnsemblPlantsGene:AT1G18650	RefSeq:AT1G18650	TAIR:AT1G18650	RefSeq:AT1G18650-TAIR-G	EnsemblPlants:AT1G18650.1	TAIR:AT1G18650.1
EMBL:AY087143	EMBL:BT006195	GO:GO:0001872	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0008150	GO:GO:0009506
GO:GO:0016020	GO:GO:0016787	GO:GO:0030054	GO:GO:0030246	GO:GO:0030247	GO:GO:0031225
GO:GO:0046658	RefSeq:NP_564059.1	Symbol:PDCB3	PFAM:PF07983	PO:PO:0000013	PO:PO:0000036
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020039	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
PANTHER:PTHR32227	PANTHER:PTHR32227:SF98	UniProt:Q9FZ86	SMART:SM00768	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000003CA3F	InterPro:X8	SEG:seg	:	:	:

Description

PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]

Coordinates

chr1:-:6418838..6421188

Molecular Weight (calculated)

19337.0 Da

IEP (calculated)

7.680

GRAVY (calculated)

0.126

Length

184 amino acids

Sequence
(BLAST)

001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.