Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 7
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43335 | Canola | extracellular | 76.51 | 81.69 |
| CDX90189 | Canola | extracellular | 79.37 | 79.62 |
| Bra010831.1-P | Field mustard | nucleus | 72.38 | 79.17 |
| VIT_10s0003g02720.t01 | Wine grape | plastid | 29.21 | 47.18 |
| KRH59086 | Soybean | cytosol, mitochondrion, nucleus | 34.29 | 43.72 |
| AT5G35740.1 | Thale cress | extracellular | 16.51 | 43.7 |
| GSMUA_Achr3P31190_001 | Banana | cytosol, nucleus, plastid | 20.63 | 43.62 |
| KRH42964 | Soybean | extracellular | 38.1 | 43.48 |
| KRH59084 | Soybean | extracellular | 34.29 | 43.03 |
| KRH37784 | Soybean | extracellular | 37.14 | 35.89 |
| KRH12824 | Soybean | extracellular, vacuole | 36.83 | 35.8 |
| Solyc02g071200.2.1 | Tomato | extracellular | 34.29 | 35.64 |
| TraesCS1D01G428500.1 | Wheat | cytosol, mitochondrion, peroxisome | 24.44 | 35.48 |
| TraesCS3A01G227300.1 | Wheat | extracellular | 36.83 | 34.83 |
| AT2G04910.1 | Thale cress | extracellular | 13.65 | 34.68 |
| EES01128 | Sorghum | extracellular | 33.65 | 34.19 |
| Zm00001d011431_P001 | Maize | plasma membrane | 33.33 | 33.98 |
| TraesCS3B01G257100.1 | Wheat | extracellular | 35.87 | 33.14 |
| Os01t0631500-01 | Rice | extracellular | 29.21 | 32.97 |
| AT2G30933.1 | Thale cress | extracellular | 23.49 | 32.6 |
| EES20007 | Sorghum | extracellular, vacuole | 25.4 | 32.39 |
| Zm00001d009686_P002 | Maize | extracellular | 25.08 | 32.24 |
| HORVU3Hr1G056800.1 | Barley | extracellular | 35.87 | 31.83 |
| TraesCS1B01G451800.1 | Wheat | endoplasmic reticulum, plasma membrane | 26.35 | 31.2 |
| GSMUA_Achr4P14960_001 | Banana | endoplasmic reticulum, extracellular | 23.49 | 31.09 |
| HORVU1Hr1G091830.4 | Barley | extracellular | 26.03 | 31.06 |
| AT4G05430.3 | Thale cress | extracellular, plasma membrane | 16.51 | 30.95 |
| Os05t0581900-01 | Rice | extracellular | 27.3 | 30.61 |
| TraesCS1A01G420600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 25.71 | 30.11 |
| AT1G18650.1 | Thale cress | extracellular | 17.46 | 29.89 |
| Zm00001d039139_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 24.13 | 29.34 |
| AT1G26450.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 18.1 | 28.93 |
| AT5G61130.1 | Thale cress | extracellular | 18.41 | 28.86 |
| AT1G69295.1 | Thale cress | extracellular | 19.05 | 27.03 |
| AT5G08000.2 | Thale cress | extracellular | 18.1 | 26.76 |
| AT2G03505.1 | Thale cress | extracellular | 13.97 | 26.19 |
| AT1G09460.1 | Thale cress | extracellular, vacuole | 26.98 | 25.76 |
| AT4G13600.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 18.73 | 25.54 |
| AT1G13830.2 | Thale cress | mitochondrion, peroxisome, plastid, vacuole | 14.92 | 22.27 |
| AT3G58100.2 | Thale cress | cytosol | 15.24 | 18.75 |
| AT5G67460.1 | Thale cress | vacuole | 19.37 | 16.05 |
| AT1G79480.1 | Thale cress | extracellular | 18.73 | 14.86 |
Protein Annotations
| MapMan:35.1 | EntrezGene:839813 | UniProt:A0A178WID2 | ProteinID:AEE31078.1 | EMBL:AK221467 | ArrayExpress:AT1G29380 |
| EnsemblPlantsGene:AT1G29380 | RefSeq:AT1G29380 | TAIR:AT1G29380 | RefSeq:AT1G29380-TAIR-G | EnsemblPlants:AT1G29380.1 | TAIR:AT1G29380.1 |
| EMBL:AY648309 | EMBL:AY773818 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016787 |
| GO:GO:0030246 | GO:GO:0030247 | GO:GO:0046658 | RefSeq:NP_174231.2 | ProteinID:OAP18107.1 | PFAM:PF07983 |
| PO:PO:0000293 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 | UniProt:Q6DST9 | SMART:SM00768 | SignalP:SignalP-noTM |
| UniParc:UPI00003BF8F4 | InterPro:X8 | SEG:seg | : | : | : |
Description
Beta-1,3 glucanase [Source:UniProtKB/TrEMBL;Acc:Q6DST9]
Coordinates
chr1:+:10283500..10286164
Molecular Weight (calculated)
30689.5 Da
IEP (calculated)
4.554
GRAVY (calculated)
-0.214
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MTHRIAPRCF STIMLLCLLY TSPLDVIAQG QGGQGDIPVV NPTAPGGSTT TPTITQPSPP SLTFPGPTTP TGGYPPLDGT TPTGGYPPLY GTTPPGGGDV
101: GGGGGGYGGG TPGGGGGGGG DTGAGAGGGG YGGGGDTGAG GGVGSGQWCI AKANASPTSL QVALDYACGY GGADCGQIQQ GAACYEPNTI RDHASFAFNS
201: YYQKHPGSDS CNFGGAAQLT STDPSKGSCH FSSSSGTVST SPPSQMSPPD FSSPPSSTYP PPITTPTTGI TGSGPPFGVA EPTGLPNSAT SVSHSLLSIF
301: TAVGILMPLL RENYL
101: GGGGGGYGGG TPGGGGGGGG DTGAGAGGGG YGGGGDTGAG GGVGSGQWCI AKANASPTSL QVALDYACGY GGADCGQIQQ GAACYEPNTI RDHASFAFNS
201: YYQKHPGSDS CNFGGAAQLT STDPSKGSCH FSSSSGTVST SPPSQMSPPD FSSPPSSTYP PPITTPTTGI TGSGPPFGVA EPTGLPNSAT SVSHSLLSIF
301: TAVGILMPLL RENYL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.