Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- vacuole 4
- plasma membrane 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29629 | Canola | extracellular | 79.3 | 78.6 |
| CDX97778 | Canola | extracellular | 79.3 | 78.6 |
| Bra021679.1-P | Field mustard | extracellular, plasma membrane, vacuole | 79.3 | 59.6 |
| AT5G35740.1 | Thale cress | extracellular | 22.03 | 42.02 |
| AT2G04910.1 | Thale cress | extracellular | 17.18 | 31.45 |
| TraesCS1D01G428500.1 | Wheat | cytosol, mitochondrion, peroxisome | 29.96 | 31.34 |
| AT4G05430.3 | Thale cress | extracellular, plasma membrane | 21.59 | 29.17 |
| AT2G03505.1 | Thale cress | extracellular | 21.15 | 28.57 |
| AT1G18650.1 | Thale cress | extracellular | 22.91 | 28.26 |
| TraesCS1B01G451800.1 | Wheat | endoplasmic reticulum, plasma membrane | 33.04 | 28.2 |
| HORVU1Hr1G091830.4 | Barley | extracellular | 32.6 | 28.03 |
| EES20007 | Sorghum | extracellular, vacuole | 30.4 | 27.94 |
| TraesCS1A01G420600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 33.04 | 27.88 |
| Zm00001d009686_P002 | Maize | extracellular | 29.96 | 27.76 |
| Os05t0581900-01 | Rice | extracellular | 33.04 | 26.69 |
| AT1G26450.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 22.91 | 26.4 |
| AT4G13600.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 25.99 | 25.54 |
| AT5G61130.1 | Thale cress | extracellular | 22.03 | 24.88 |
| AT1G09460.1 | Thale cress | extracellular, vacuole | 36.12 | 24.85 |
| Zm00001d039139_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 28.19 | 24.71 |
| AT5G08000.2 | Thale cress | extracellular | 22.47 | 23.94 |
| AT1G29380.1 | Thale cress | extracellular | 32.6 | 23.49 |
| Os01t0631500-01 | Rice | extracellular | 28.63 | 23.3 |
| AT1G69295.1 | Thale cress | extracellular | 21.59 | 22.07 |
| Zm00001d011431_P001 | Maize | plasma membrane | 29.52 | 21.68 |
| EES01128 | Sorghum | extracellular | 29.07 | 21.29 |
| TraesCS3A01G227300.1 | Wheat | extracellular | 29.52 | 20.12 |
| AT1G13830.2 | Thale cress | mitochondrion, peroxisome, plastid, vacuole | 18.5 | 19.91 |
| TraesCS3B01G257100.1 | Wheat | extracellular | 29.07 | 19.35 |
| HORVU3Hr1G056800.1 | Barley | extracellular | 29.52 | 18.87 |
| AT3G58100.2 | Thale cress | cytosol | 20.7 | 18.36 |
| AT5G67460.1 | Thale cress | vacuole | 24.67 | 14.74 |
| AT1G79480.1 | Thale cress | extracellular | 22.47 | 12.85 |
Protein Annotations
| MapMan:35.1 | EntrezGene:3767975 | UniProt:A0A178VUG3 | ProteinID:AEC08461.1 | ArrayExpress:AT2G30933 | EnsemblPlantsGene:AT2G30933 |
| RefSeq:AT2G30933 | TAIR:AT2G30933 | RefSeq:AT2G30933-TAIR-G | EnsemblPlants:AT2G30933.1 | TAIR:AT2G30933.1 | EMBL:DQ487540 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0030246 |
| GO:GO:0030247 | GO:GO:0046658 | RefSeq:NP_001031450.1 | ProteinID:OAP09454.1 | PFAM:PF07983 | PO:PO:0000293 |
| PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 | UniProt:Q1G3P4 | SMART:SM00768 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI00005DC018 | InterPro:X8 | SEG:seg | : | : | : |
Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q1G3P4]
Coordinates
chr2:-:13163993..13166902
Molecular Weight (calculated)
24067.2 Da
IEP (calculated)
4.492
GRAVY (calculated)
0.019
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKGFRLVTS LLLLSFFFSG TKAITEPIEE EKDITTPLAT NPTTTPTTVV PNSDSDASAV ATTPLTIPSS PHGVAYPGDQ SWCVARENVA KMALQAALDY
101: ACGIGGADCS EIQEGGNCYN PNSLRAHASF AFNSYYQKNP IPSSCNFDGT AITISADPSL GSCHFPSTST SESILNVTSE DGLGLFGRIP SHPTPKPEAS
201: TSSSRTLISF LYFLCFCVLY PLVITLT
101: ACGIGGADCS EIQEGGNCYN PNSLRAHASF AFNSYYQKNP IPSSCNFDGT AITISADPSL GSCHFPSTST SESILNVTSE DGLGLFGRIP SHPTPKPEAS
201: TSSSRTLISF LYFLCFCVLY PLVITLT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.