Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400047134 | Potato | extracellular, golgi, vacuole | 95.64 | 96.96 |
| Solyc07g047710.2.1 | Tomato | extracellular | 13.35 | 42.98 |
| CDY64750 | Canola | endoplasmic reticulum, vacuole | 33.79 | 41.2 |
| Bra020023.1-P | Field mustard | endoplasmic reticulum, vacuole | 32.7 | 40.68 |
| CDX94970 | Canola | plastid | 32.7 | 40.54 |
| Bra030780.1-P | Field mustard | endoplasmic reticulum, extracellular | 32.97 | 39.41 |
| AT1G09460.1 | Thale cress | extracellular, vacuole | 35.15 | 39.09 |
| TraesCS4D01G132800.1 | Wheat | extracellular, plasma membrane, vacuole | 33.52 | 37.27 |
| TraesCS4B01G138000.1 | Wheat | extracellular, plasma membrane, vacuole | 33.24 | 36.97 |
| TraesCS4A01G178000.1 | Wheat | extracellular, plasma membrane, vacuole | 32.7 | 36.36 |
| Solyc07g056310.2.1 | Tomato | extracellular | 24.25 | 36.03 |
| Solyc11g012580.1.1 | Tomato | extracellular | 11.44 | 35.9 |
| CDY32184 | Canola | vacuole | 33.24 | 34.56 |
| CDY31085 | Canola | plastid | 32.97 | 34.47 |
| KXG27714 | Sorghum | vacuole | 32.15 | 34.2 |
| Zm00001d004933_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 30.79 | 33.14 |
| Solyc04g058080.2.1 | Tomato | extracellular | 14.99 | 30.9 |
| VIT_14s0060g00440.t01 | Wine grape | vacuole | 49.59 | 29.59 |
| Solyc03g115200.2.1 | Tomato | extracellular | 14.99 | 29.41 |
| Solyc02g071200.2.1 | Tomato | extracellular | 24.25 | 29.37 |
| TraesCS5B01G513000.1 | Wheat | extracellular, vacuole | 32.15 | 28.92 |
| TraesCS4A01G358500.1 | Wheat | extracellular | 32.15 | 28.78 |
| TraesCS5D01G513400.1 | Wheat | extracellular | 31.88 | 28.75 |
| Solyc09g091920.2.1 | Tomato | endoplasmic reticulum, extracellular | 15.26 | 28.43 |
| HORVU5Hr1G117440.1 | Barley | endoplasmic reticulum, golgi, mitochondrion, plastid | 31.88 | 28.19 |
| KRH33760 | Soybean | vacuole | 46.87 | 28.15 |
| KRG90471 | Soybean | vacuole | 46.59 | 28.12 |
| KRH68400 | Soybean | extracellular | 40.87 | 27.88 |
| Solyc05g012380.2.1 | Tomato | extracellular | 14.99 | 27.23 |
| KRG96680 | Soybean | extracellular | 39.24 | 27.22 |
| Solyc01g010310.2.1 | Tomato | extracellular | 13.9 | 26.98 |
| Zm00001d034729_P002 | Maize | endoplasmic reticulum, vacuole | 35.69 | 26.68 |
| Solyc05g016390.2.1 | Tomato | endoplasmic reticulum, extracellular | 18.53 | 26.36 |
| Solyc07g053430.2.1 | Tomato | endoplasmic reticulum, extracellular | 16.08 | 26.22 |
| Solyc12g098410.1.1 | Tomato | endoplasmic reticulum, extracellular | 13.35 | 24.75 |
| Solyc12g017360.1.1 | Tomato | cytosol, peroxisome, plastid | 18.8 | 23.39 |
| Os03t0833600-01 | Rice | plasma membrane | 35.97 | 23.0 |
| EER90586 | Sorghum | extracellular | 36.51 | 21.79 |
| Zm00001d012917_P001 | Maize | plasma membrane | 35.42 | 21.21 |
| GSMUA_Achr11P... | Banana | extracellular, plastid, vacuole | 28.34 | 19.73 |
| GSMUA_Achr2P02010_001 | Banana | cytosol | 23.98 | 18.76 |
| Solyc04g005420.2.1 | Tomato | extracellular, vacuole | 15.26 | 18.24 |
Protein Annotations
| MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 |
| GO:GO:0046658 | UniProt:K4B1E1 | PFAM:PF07983 | PRINTS:PR01217 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF122 |
| SMART:SM00768 | SignalP:SignalP-TM | EnsemblPlantsGene:Solyc01g101120.2 | EnsemblPlants:Solyc01g101120.2.1 | TMHMM:TMhelix | UniParc:UPI0002767A80 |
| InterPro:X8 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:90971070..90973642
Molecular Weight (calculated)
37485.4 Da
IEP (calculated)
5.597
GRAVY (calculated)
-0.052
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MPNTIMTRGA SKFIFLFFLF ILLASISGLS PAKRIEHREL ERQKEQKIHF FGKGLLELLP IRAIKHDLMD PPATTGFPTT PIVNPVTTPS NMPPDNSAPT
101: VVTVPSTNPN LGIPNFGSIP PAAPSVTPVT DPNPNPPVPL TNPVTTPSTS TPVSNPVTTN PNPVGGVPAT TPVTPPATTN APATGGQSWC IAKNGAGDTS
201: LQSALDYACG MGADCSAIQQ GGSCYNPNSL EGHASYAFNS YFQKNPAQTS CDFGGAAMIT NSNPSTGSCV FPASGSSLSS PTTTTTPMSG TPAPTTSSST
301: GAAIPGLAPP TVTNGNDSGF GMMPSGIGDS IPPTTTTSLS MSNELQPLVG CIVLVASIAT SKLVLEF
101: VVTVPSTNPN LGIPNFGSIP PAAPSVTPVT DPNPNPPVPL TNPVTTPSTS TPVSNPVTTN PNPVGGVPAT TPVTPPATTN APATGGQSWC IAKNGAGDTS
201: LQSALDYACG MGADCSAIQQ GGSCYNPNSL EGHASYAFNS YFQKNPAQTS CDFGGAAMIT NSNPSTGSCV FPASGSSLSS PTTTTTPMSG TPAPTTSSST
301: GAAIPGLAPP TVTNGNDSGF GMMPSGIGDS IPPTTTTSLS MSNELQPLVG CIVLVASIAT SKLVLEF
001: MAKQSYFFVF TFLFLSLLSY CSSTTTHHDV LNPPTVFPTN PTTTPTATFP PVTITPTNPA TTVPIVPPVT TIPPPTLTPP PVITIPPPTL TPPVTNPVTN
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z2]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.