Factsheet for Bra020023.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 4
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX94970	Canola	plastid	97.63	97.3
CDY64750	Canola	endoplasmic reticulum, vacuole	98.31	96.35
Bra030780.1-P	Field mustard	endoplasmic reticulum, extracellular	88.47	85.02
AT1G09460.1	Thale cress	extracellular, vacuole	88.14	78.79
Bra034233.1-P	Field mustard	cytosol	16.61	44.55
Bra035382.1-P	Field mustard	extracellular	15.25	37.82
PGSC0003DMT400047134	Potato	extracellular, golgi, vacuole	40.34	32.87
Solyc01g101120.2.1	Tomato	endoplasmic reticulum, golgi	40.68	32.7
TraesCS4A01G178000.1	Wheat	extracellular, plasma membrane, vacuole	35.59	31.82
TraesCS4B01G138000.1	Wheat	extracellular, plasma membrane, vacuole	35.25	31.52
TraesCS4D01G132800.1	Wheat	extracellular, plasma membrane, vacuole	34.92	31.21
KXG27714	Sorghum	vacuole	34.58	29.57
Zm00001d004933_P001	Maize	endoplasmic reticulum, extracellular, vacuole	33.9	29.33
Bra012458.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	19.32	29.08
Bra003318.1-P	Field mustard	extracellular	16.61	28.82
Bra010831.1-P	Field mustard	nucleus	27.8	28.47
Bra026879.1-P	Field mustard	extracellular	13.56	28.17
Bra035941.1-P	Field mustard	extracellular	18.98	28.14
Bra004003.1-P	Field mustard	extracellular	20.68	27.98
Bra021679.1-P	Field mustard	extracellular, plasma membrane, vacuole	27.8	27.15
Bra026878.1-P	Field mustard	extracellular	12.88	26.95
Bra004688.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	16.27	26.67
Bra038314.1-P	Field mustard	mitochondrion	20.34	26.55
Bra026880.1-P	Field mustard	extracellular	15.93	26.26
Bra029334.1-P	Field mustard	extracellular	16.95	25.64
Bra012981.1-P	Field mustard	extracellular, vacuole	18.64	24.77
Bra009313.1-P	Field mustard	extracellular	17.63	24.53
Bra016724.1-P	Field mustard	extracellular	14.24	24.42
TraesCS4A01G358500.1	Wheat	extracellular	33.9	24.39
Bra025116.1-P	Field mustard	extracellular	13.22	24.22
TraesCS5B01G513000.1	Wheat	extracellular, vacuole	33.22	24.02
KRH33760	Soybean	vacuole	49.49	23.9
Bra019700.1-P	Field mustard	extracellular	15.93	23.86
KRH68400	Soybean	extracellular	43.05	23.61
KRG90471	Soybean	vacuole	48.47	23.52
Bra032314.1-P	Field mustard	plastid	30.17	23.48
TraesCS5D01G513400.1	Wheat	extracellular	32.2	23.34
KRG96680	Soybean	extracellular	41.69	23.25
Bra032719.1-P	Field mustard	endoplasmic reticulum, extracellular	16.27	23.19
HORVU5Hr1G117440.1	Barley	endoplasmic reticulum, golgi, mitochondrion, plastid	32.54	23.13
VIT_14s0060g00440.t01	Wine grape	vacuole	46.1	22.11
Zm00001d034729_P002	Maize	endoplasmic reticulum, vacuole	34.24	20.57
Os03t0833600-01	Rice	plasma membrane	37.97	19.51
GSMUA_Achr11P...	Banana	extracellular, plastid, vacuole	32.2	18.03
EER90586	Sorghum	extracellular	36.95	17.72
GSMUA_Achr2P02010_001	Banana	cytosol	28.14	17.7
Zm00001d012917_P001	Maize	plasma membrane	35.93	17.29
Bra008414.1-P	Field mustard	cytosol, nucleus, plastid, vacuole	18.31	16.72
Bra035122.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	20.34	15.35
Bra031835.1-P	Field mustard	vacuole	19.66	15.3

Protein Annotations

EnsemblPlants:Bra020023.1	EnsemblPlants:Bra020023.1-P	EnsemblPlantsGene:Bra020023	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF118
PFAM:PF07983	SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	UniParc:UPI000253E8B1	UniProt:M4DU30
MapMan:35.1	:	:	:	:	:

Description

AT1G09460 (E=1e-045) | glucan endo-1,3-beta-glucosidase-related

Coordinates

chrA06:+:3229320..3230397

Molecular Weight (calculated)

30270.4 Da

IEP (calculated)

6.485

GRAVY (calculated)

-0.070

Length

295 amino acids

Sequence
(BLAST)

001: MAKQSYFFLF LSLVSLSSST TTTHDVLNPP TVFPTNPTTT PPVTTFPPVT ITPTNPATTV PLTPPVTTVP ATLTPPVTNP VTQYPPTQPS GTVPVIPSNS
101: PSVSGQSWCV AKPGASQTSL QLALDYACGL GGADCSQIQQ GGNCYSPISL QNHASFAFNS YYQKNPSPQS CDFGGAASLV STNPSTGSCI YQTGSSTSTT
201: PTPSTQTVNQ PPVTSTPIIP TGGGIIGVGT PPAVFNPANP SSNTLNNPLS GGPAVYGFDG SPNGNNPTLS DSTNLQLHFG HTLVVTLILH AVLFH

Best Arabidopsis Sequence Match ( AT1G09460.1 )
(BLAST)

001: MAKQSYFFVF TFLFLSLLSY CSSTTTHHDV LNPPTVFPTN PTTTPTATFP PVTITPTNPA TTVPIVPPVT TIPPPTLTPP PVITIPPPTL TPPVTNPVTN
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH

Arabidopsis Description

Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z2]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.