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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 6
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY07353 Canola extracellular 100.0 100.0
CDY04273 Canola extracellular 98.62 98.62
AT1G69295.1 Thale cress extracellular 81.19 79.73
Bra038314.1-P Field mustard mitochondrion 77.06 74.34
Bra012458.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 62.39 69.39
GSMUA_Achr4P23440_001 Banana cytosol 29.82 43.33
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 36.7 41.88
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 36.24 41.15
GSMUA_Achr9P07140_001 Banana extracellular 34.86 40.86
PGSC0003DMT400072939 Potato extracellular 38.53 40.78
EER97492 Sorghum extracellular 35.78 40.21
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 33.03 40.0
Bra026880.1-P Field mustard extracellular 32.57 39.66
Solyc05g012380.2.1 Tomato extracellular 36.7 39.6
GSMUA_Achr5P08900_001 Banana extracellular 34.4 39.47
Bra025116.1-P Field mustard extracellular 28.9 39.13
GSMUA_Achr7P26650_001 Banana extracellular 20.64 38.79
Bra026879.1-P Field mustard extracellular 25.23 38.73
GSMUA_Achr8P28170_001 Banana extracellular 27.52 38.71
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 33.03 38.3
PGSC0003DMT400003054 Potato extracellular 33.49 38.22
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 34.4 38.07
Bra035382.1-P Field mustard extracellular 20.64 37.82
Zm00001d047293_P001 Maize endoplasmic reticulum, extracellular, vacuole 33.95 37.76
Bra026878.1-P Field mustard extracellular 24.31 37.59
TraesCS6B01G138700.1 Wheat endoplasmic reticulum, extracellular, vacuole 33.95 37.37
TraesCS6D01G099100.1 Wheat endoplasmic reticulum, extracellular, vacuole 32.57 37.37
Os07t0600700-01 Rice extracellular 33.03 37.11
TraesCS6A01G110400.1 Wheat endoplasmic reticulum, extracellular, vacuole 33.49 37.06
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 33.49 36.68
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 33.49 36.68
Solyc01g010310.2.1 Tomato extracellular 31.65 36.51
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 33.95 36.1
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 33.03 36.0
Zm00001d029539_P001 Maize endoplasmic reticulum, extracellular, vacuole 33.03 36.0
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 32.57 35.86
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 32.57 35.86
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 34.4 35.55
Bra016724.1-P Field mustard extracellular 27.98 35.47
TraesCS5B01G398000.1 Wheat extracellular 26.15 34.76
TraesCS5D01G403000.1 Wheat extracellular 26.15 34.34
TraesCS5A01G393200.1 Wheat extracellular 26.15 34.13
TraesCS1A01G332500.1 Wheat extracellular 32.57 33.97
Bra029334.1-P Field mustard extracellular 30.28 33.85
Bra019700.1-P Field mustard extracellular 30.28 33.5
TraesCS1B01G346200.2 Wheat endoplasmic reticulum, extracellular, vacuole 32.11 33.49
TraesCS1D01G335200.1 Wheat endoplasmic reticulum, extracellular, vacuole 33.03 33.18
TraesCS3D01G299600.1 Wheat extracellular 29.82 33.16
TraesCS3A01G302400.1 Wheat extracellular 29.82 33.16
Os03t0756300-01 Rice extracellular 26.61 33.14
TraesCS5B01G399400.1 Wheat extracellular 23.85 32.91
Os01t0763900-01 Rice extracellular 31.19 32.85
Bra035941.1-P Field mustard extracellular 28.9 31.66
HORVU4Hr1G028360.1 Barley peroxisome, plastid 17.89 30.95
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 34.4 30.86
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 31.65 30.53
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 25.69 29.79
OQU87600 Sorghum extracellular 25.69 29.79
Bra009313.1-P Field mustard extracellular 28.9 29.72
Os05t0512600-01 Rice extracellular 30.28 28.95
Bra034233.1-P Field mustard cytosol 14.22 28.18
Bra012981.1-P Field mustard extracellular, vacuole 28.44 27.93
EES18492 Sorghum extracellular 27.52 26.2
Zm00001d010728_P005 Maize extracellular 26.15 26.03
Zm00001d038682_P001 Maize extracellular 27.06 25.65
Bra032719.1-P Field mustard endoplasmic reticulum, extracellular 24.31 25.6
Zm00001d013250_P003 Maize extracellular 25.69 25.0
Bra004688.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 20.18 24.44
HORVU2Hr1G033470.1 Barley cytosol, plastid 33.03 24.24
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 29.82 23.64
Bra003318.1-P Field mustard extracellular 18.35 23.53
HORVU3Hr1G074010.3 Barley cytosol, plastid 30.28 22.68
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 24.77 22.13
KXG37528 Sorghum mitochondrion 25.69 21.13
TraesCS5A01G548300.1 Wheat plasma membrane 18.81 20.92
Bra020023.1-P Field mustard endoplasmic reticulum, vacuole 27.98 20.68
Bra030780.1-P Field mustard endoplasmic reticulum, extracellular 28.9 20.52
Bra010831.1-P Field mustard nucleus 26.61 20.14
Bra021679.1-P Field mustard extracellular, plasma membrane, vacuole 26.61 19.21
HORVU5Hr1G096090.6 Barley plastid 20.18 18.8
Bra032314.1-P Field mustard plastid 29.36 16.89
Bra008414.1-P Field mustard cytosol, nucleus, plastid, vacuole 17.89 12.07
Bra035122.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 19.27 10.74
Bra031835.1-P Field mustard vacuole 17.43 10.03
Protein Annotations
EnsemblPlants:Bra004003.1EnsemblPlants:Bra004003.1-PEnsemblPlantsGene:Bra004003InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF118
PFAM:PF07983SEG:segSignalP:SignalP-noTMSMART:SM00768UniParc:UPI000254197EUniProt:M4CIG9
MapMan:35.1:::::
Description
AT1G69295 (E=5e-043) PDCB4 | PDCB4 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4); callose binding / polysaccharide binding
Coordinates
chrA07:+:16241407..16242641
Molecular Weight (calculated)
21418.0 Da
IEP (calculated)
5.697
GRAVY (calculated)
-0.024
Length
218 amino acids
Sequence
(BLAST)
001: MSVLLPLCLI ISMIAYSNAA YCVCKDGNEQ VLQKAIDYAC GAGADCTQIQ QNGACYQPNT VKAHCDVAVN SYYQKKASSG ATCDFNGAAI ISSSPPSTAS
101: SCLTGSSSSG TPSTGTPTTG TPTTGTPTSG FPSTGTPSTG TPTTGMPNTG TPSTSTGMPT SGTPTNGMPT SSSSSVFPGT TLGPTGSGGL DPSGGEKISV
201: RTNSVFLLLA GAAIGLVV
Best Arabidopsis Sequence Match ( AT1G69295.1 )
(BLAST)
001: MSVLLPLCLI ISMFTYSNAA YCLCKEGNEQ VLQKAIDYAC GNGADCTQIQ PTGACYQPNT VKNHCDVAVN SYYQKKASSG ATCDFNGAAS PSTTPPSTAS
101: NCLTGSSSSG TPTTGTPTTG TPTSGTPTTG TPTTGTPTTG TPTSGTPTSG FPNTGTPNTG TNTGMPNSNG MPTSSSSSVF PGTTLGPTGS GGLGDPNAGE
201: KLSVRTNTVV FLLTGVAAML VI
Arabidopsis Description
PDCB4PLASMODESMATA CALLOSE-BINDING PROTEIN 4 [Source:UniProtKB/Swiss-Prot;Acc:Q93V72]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.