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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 5
  • golgi 4
  • plastid 3
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:plastid
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY02169 Canola extracellular 86.94 99.48
CDY23085 Canola extracellular, plasma membrane, vacuole 83.33 95.85
Bra029334.1-P Field mustard extracellular 76.13 86.67
Bra035941.1-P Field mustard extracellular 75.23 83.92
AT5G61130.1 Thale cress extracellular 72.52 80.1
Bra009313.1-P Field mustard extracellular 56.76 59.43
Bra026879.1-P Field mustard extracellular 28.83 45.07
GSMUA_Achr4P23440_001 Banana cytosol 30.18 44.67
GSMUA_Achr7P26650_001 Banana extracellular 22.52 43.1
TraesCS5B01G399400.1 Wheat extracellular 30.63 43.04
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 34.23 42.22
GSMUA_Achr9P07140_001 Banana extracellular 35.14 41.94
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 35.59 41.15
Bra026878.1-P Field mustard extracellular 26.13 41.13
Bra026880.1-P Field mustard extracellular 32.88 40.78
TraesCS5B01G398000.1 Wheat extracellular 29.73 40.24
Bra016724.1-P Field mustard extracellular 30.18 38.95
TraesCS5A01G393200.1 Wheat extracellular 29.28 38.92
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 34.68 38.89
Os03t0756300-01 Rice extracellular 30.63 38.86
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 33.33 38.74
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 34.68 38.69
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 34.68 38.69
Os07t0600700-01 Rice extracellular 33.78 38.66
EER97492 Sorghum extracellular 33.78 38.66
TraesCS5D01G403000.1 Wheat extracellular 28.83 38.55
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 34.23 38.0
Bra019700.1-P Field mustard extracellular 33.33 37.56
HORVU4Hr1G028360.1 Barley peroxisome, plastid 21.17 37.3
Bra025116.1-P Field mustard extracellular 27.03 37.27
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 32.88 36.87
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 31.08 36.7
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 33.78 36.59
GSMUA_Achr5P08900_001 Banana extracellular 31.08 36.32
GSMUA_Achr8P28170_001 Banana extracellular 25.23 36.13
TraesCS6D01G099100.1 Wheat endoplasmic reticulum, extracellular, vacuole 30.63 35.79
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 30.18 35.64
OQU87600 Sorghum extracellular 29.28 34.57
TraesCS6B01G138700.1 Wheat endoplasmic reticulum, extracellular, vacuole 30.63 34.34
TraesCS3D01G299600.1 Wheat extracellular 30.18 34.18
TraesCS3A01G302400.1 Wheat extracellular 30.18 34.18
TraesCS6A01G110400.1 Wheat endoplasmic reticulum, extracellular, vacuole 30.18 34.01
Os01t0763900-01 Rice extracellular 31.08 33.33
Bra012458.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 28.83 32.65
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 34.68 31.69
Zm00001d047293_P001 Maize endoplasmic reticulum, extracellular, vacuole 27.48 31.12
Bra035382.1-P Field mustard extracellular 16.67 31.09
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 27.48 30.96
Zm00001d029539_P001 Maize endoplasmic reticulum, extracellular, vacuole 27.48 30.5
Zm00001d013250_P003 Maize extracellular 30.63 30.36
Bra034233.1-P Field mustard cytosol 14.86 30.0
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 27.93 29.38
Zm00001d010728_P005 Maize extracellular 28.38 28.77
TraesCS1B01G346200.2 Wheat endoplasmic reticulum, extracellular, vacuole 27.03 28.71
Bra004003.1-P Field mustard extracellular 27.93 28.44
Os05t0512600-01 Rice extracellular 28.83 28.07
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 28.38 27.88
TraesCS1D01G335200.1 Wheat endoplasmic reticulum, extracellular, vacuole 27.03 27.65
EES18492 Sorghum extracellular 28.38 27.51
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 29.73 27.05
TraesCS5A01G548300.1 Wheat plasma membrane 23.87 27.04
TraesCS1A01G332500.1 Wheat extracellular 25.23 26.79
Bra032719.1-P Field mustard endoplasmic reticulum, extracellular 24.77 26.57
Zm00001d038682_P001 Maize extracellular 27.03 26.09
HORVU5Hr1G096090.6 Barley plastid 27.48 26.07
HORVU2Hr1G033470.1 Barley cytosol, plastid 34.68 25.93
KXG37528 Sorghum mitochondrion 30.63 25.66
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 30.63 24.73
HORVU3Hr1G074010.3 Barley cytosol, plastid 30.63 23.37
Bra038314.1-P Field mustard mitochondrion 23.42 23.01
Bra003318.1-P Field mustard extracellular 17.57 22.94
Bra004688.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 18.47 22.78
Bra020023.1-P Field mustard endoplasmic reticulum, vacuole 24.77 18.64
Bra030780.1-P Field mustard endoplasmic reticulum, extracellular 24.77 17.92
Bra010831.1-P Field mustard nucleus 20.27 15.62
Bra032314.1-P Field mustard plastid 24.77 14.51
Bra021679.1-P Field mustard extracellular, plasma membrane, vacuole 19.37 14.24
Bra031835.1-P Field mustard vacuole 21.17 12.4
Bra008414.1-P Field mustard cytosol, nucleus, plastid, vacuole 16.22 11.15
Bra035122.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 18.02 10.23
Protein Annotations
EnsemblPlants:Bra012981.1EnsemblPlants:Bra012981.1-PEnsemblPlantsGene:Bra012981InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF237
PFAM:PF07983SEG:segSignalP:SignalP-noTMSMART:SM00768UniParc:UPI000254050BUniProt:M4D921
MapMan:35.1:::::
Description
AT5G61130 (E=2e-069) PDCB1 | PDCB1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1); callose binding / polysaccharide binding
Coordinates
chrA03:-:21221639..21223315
Molecular Weight (calculated)
22933.7 Da
IEP (calculated)
7.678
GRAVY (calculated)
-0.024
Length
222 amino acids
Sequence
(BLAST)
001: MAALVLSLLL LAMAGHSSKN FHSSFRFLGI SLVSLTVRVS SLSGYGASWC VCKTGLSDTV LQSTLDYACG NGADCNPTHP KAPCFDPDNV RSHCNYAVNS
101: FFQKKHQAPG TCDFSGTATP TNSDPSYSGC TFPTSASGSG GSTTVTPGTT NPKGSSTTLP GGNGNSPFSG TSSTNGVFGN NSTGINPDYT TESSAFALRN
201: SSTFLTYLLL IALSGFCSFM ML
Best Arabidopsis Sequence Match ( AT5G61130.1 )
(BLAST)
001: MAALVLSLLL LSLAGHSSAS WCVCKTGLSD TVLQATLDYA CGNGADCNPT KPKQSCFNPD NVRSHCNYAV NSFFQKKGQS PGSCNFDGTA TPTNSDPSYT
101: GCAFPTSASG SSGSTTVTPG TTNPKGSPTT TTLPGSGTNS PYSGNPTNGV FGGNSTGGTT GTGINPDYTT DSSAFALKNS SKLFICLLLI ASSGFCSFLM
201: L
Arabidopsis Description
PDCB1PDCB1 [Source:UniProtKB/TrEMBL;Acc:A0A178URD1]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.