Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 5
- vacuole 4
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G332800.1 | Wheat | plasma membrane | 96.07 | 96.07 |
| TraesCS7A01G346300.1 | Wheat | endoplasmic reticulum, plasma membrane | 92.13 | 92.13 |
| Os06t0537700-01 | Rice | extracellular | 73.03 | 69.89 |
| OQU76517 | Sorghum | extracellular | 66.85 | 68.39 |
| Zm00001d046155_P001 | Maize | extracellular | 65.73 | 66.48 |
| HORVU0Hr1G021440.2 | Barley | plastid | 57.87 | 65.19 |
| GSMUA_Achr10P... | Banana | extracellular | 55.62 | 55.93 |
| KRH55823 | Soybean | extracellular | 43.26 | 44.25 |
| VIT_12s0028g02540.t01 | Wine grape | extracellular | 41.57 | 42.53 |
| KRH25694 | Soybean | extracellular | 39.33 | 40.46 |
| Bra003318.1-P | Field mustard | extracellular | 37.64 | 39.41 |
| CDX98264 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 37.64 | 39.41 |
| CDY56240 | Canola | extracellular | 37.64 | 38.73 |
| KRH27014 | Soybean | extracellular | 37.08 | 37.71 |
| CDY70929 | Canola | extracellular | 37.64 | 37.22 |
| CDX79873 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 37.08 | 36.87 |
| Bra004688.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 37.08 | 36.67 |
| KRH22312 | Soybean | extracellular | 37.08 | 36.07 |
| Solyc07g053430.2.1 | Tomato | endoplasmic reticulum, extracellular | 44.38 | 35.11 |
| TraesCS5B01G398000.1 | Wheat | extracellular | 28.09 | 30.49 |
| TraesCS5B01G399400.1 | Wheat | extracellular | 26.97 | 30.38 |
| TraesCS5B01G395600.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 23.03 | 29.93 |
| TraesCS5B01G465400.1 | Wheat | extracellular, plasma membrane | 28.65 | 28.02 |
| TraesCS6B01G138700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 30.9 | 27.78 |
| TraesCS2B01G272100.1 | Wheat | extracellular | 24.72 | 25.43 |
| AT3G58100.2 | Thale cress | cytosol | 36.52 | 25.39 |
| TraesCS2B01G204700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 28.65 | 24.88 |
| TraesCS1B01G346200.2 | Wheat | endoplasmic reticulum, extracellular, vacuole | 26.97 | 22.97 |
| PGSC0003DMT400024290 | Potato | extracellular, vacuole | 44.38 | 22.83 |
| TraesCS7B01G384100.1 | Wheat | extracellular | 23.6 | 18.92 |
| TraesCS3B01G334200.1 | Wheat | golgi, nucleus, plasma membrane | 28.65 | 18.55 |
| TraesCS1B01G451800.1 | Wheat | endoplasmic reticulum, plasma membrane | 25.84 | 17.29 |
| TraesCS4B01G138000.1 | Wheat | extracellular, plasma membrane, vacuole | 27.53 | 14.85 |
| TraesCS3B01G257100.1 | Wheat | extracellular | 25.84 | 13.49 |
| TraesCS2B01G444800.1 | Wheat | extracellular, plasma membrane | 26.97 | 13.45 |
| TraesCS5B01G513000.1 | Wheat | extracellular, vacuole | 29.21 | 12.75 |
| TraesCS5B01G366600.1 | Wheat | plastid | 23.03 | 9.67 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G236800.1 | EnsemblPlantsGene:TraesCS7B01G236800 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 | PFAM:PF07983 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 | TMHMM:TMhelix | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr7B:-:440818488..440821783
Molecular Weight (calculated)
18081.1 Da
IEP (calculated)
5.948
GRAVY (calculated)
0.226
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAASPPSLH LALLLFAAHA AVGGAAGAVG VSEGGQLWCV AKNNAEDGAL QSAIDWACGP NGGADCRAIQ QGGACYEPPD LLAHASYAFN DYFLRSGGAA
101: SPAACDFSGA AALIGLNPSH GNCVFPSSSS PRNGSFTGIT TYGRTGADLS QSSSWRLDTR SFILCMSLSV TFFVASHF
101: SPAACDFSGA AALIGLNPSH GNCVFPSSSS PRNGSFTGIT TYGRTGADLS QSSSWRLDTR SFILCMSLSV TFFVASHF
001: MIMSLPQCSH LRLSILAATA AMLMVITTAQ IGGQVIQVEL WCVAKNNAED SSLQTAIEWA CGQGGADCGP IQQGGPCNDP TDVQKMASFV FNNYYLKNGE
101: EDEACNFNNN AALTSLNPSQ GTCKYPSSKG ANNGRLADDT SMGAGQADMS RGGRPISSSW MVTFIGFGSL LTMTWIIHHL
101: EDEACNFNNN AALTSLNPSQ GTCKYPSSKG ANNGRLADDT SMGAGQADMS RGGRPISSSW MVTFIGFGSL LTMTWIIHHL
Arabidopsis Description
PDCB5Plasmodesmata callose-binding protein 5 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSI7]
SUBAcon: [extracellular,endoplasmic reticulum]
SUBAcon: [extracellular,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.