Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 4
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G444800.1 | Wheat | extracellular, plasma membrane | 93.91 | 94.96 |
| TraesCS2D01G423000.1 | Wheat | extracellular, plasma membrane | 91.69 | 92.98 |
| HORVU2Hr1G099430.1 | Barley | plastid | 56.79 | 89.13 |
| Zm00001d042912_P001 | Maize | nucleus | 32.41 | 65.73 |
| Zm00001d002348_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid | 50.97 | 56.1 |
| GSMUA_Achr8P33530_001 | Banana | cytosol, extracellular, plastid, vacuole | 26.87 | 47.09 |
| KXG27096 | Sorghum | extracellular, vacuole | 54.57 | 46.24 |
| VIT_03s0017g02240.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 29.36 | 41.9 |
| KRH43685 | Soybean | plastid | 27.15 | 39.52 |
| TraesCS7A01G481700.1 | Wheat | extracellular | 23.27 | 38.36 |
| PGSC0003DMT400025000 | Potato | nucleus | 28.81 | 37.41 |
| Solyc12g017360.1.1 | Tomato | cytosol, peroxisome, plastid | 30.47 | 37.29 |
| KRG90034 | Soybean | extracellular, plasma membrane | 29.64 | 36.15 |
| VIT_19s0085g00810.t01 | Wine grape | golgi, vacuole | 36.29 | 35.6 |
| Solyc05g016390.2.1 | Tomato | endoplasmic reticulum, extracellular | 25.21 | 35.27 |
| CDY56795 | Canola | cytosol, nucleus, plastid, vacuole | 29.64 | 34.19 |
| KRH13771 | Soybean | vacuole | 32.96 | 33.15 |
| Zm00001d026281_P003 | Maize | plastid | 49.86 | 32.85 |
| Bra008414.1-P | Field mustard | cytosol, nucleus, plastid, vacuole | 29.36 | 32.82 |
| TraesCS5A01G390800.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 12.47 | 32.37 |
| CDX87377 | Canola | endoplasmic reticulum, extracellular, vacuole | 31.58 | 29.61 |
| TraesCS2A01G252300.1 | Wheat | extracellular | 14.13 | 29.48 |
| TraesCS5A01G393200.1 | Wheat | extracellular | 13.57 | 29.34 |
| CDX88545 | Canola | endoplasmic reticulum, extracellular, vacuole | 31.58 | 29.31 |
| Bra035122.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 31.02 | 28.64 |
| AT1G79480.1 | Thale cress | extracellular | 30.75 | 27.96 |
| TraesCS7A01G346300.1 | Wheat | endoplasmic reticulum, plasma membrane | 13.57 | 27.53 |
| TraesCS5A01G456400.1 | Wheat | extracellular, plasma membrane | 13.3 | 26.37 |
| TraesCS5A01G365000.1 | Wheat | extracellular | 33.24 | 25.92 |
| TraesCS5A01G548300.1 | Wheat | plasma membrane | 13.3 | 24.49 |
| TraesCS6A01G110400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 13.02 | 23.86 |
| TraesCS1A01G332500.1 | Wheat | extracellular | 13.57 | 23.45 |
| TraesCS2A01G177600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 12.74 | 23.0 |
| TraesCS3A01G302400.1 | Wheat | extracellular | 12.19 | 22.45 |
| TraesCS4A01G178000.1 | Wheat | extracellular, plasma membrane, vacuole | 19.11 | 20.91 |
| TraesCS1A01G420600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 15.51 | 20.82 |
| TraesCS3A01G227300.1 | Wheat | extracellular | 16.34 | 17.72 |
| TraesCS4A01G358500.1 | Wheat | extracellular | 18.84 | 16.59 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G425000.1 | EnsemblPlantsGene:TraesCS2A01G425000 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF237 | PFAM:PF07983 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2A:+:678964347..678965773
Molecular Weight (calculated)
34724.6 Da
IEP (calculated)
4.161
GRAVY (calculated)
-0.131
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MARNCRISSL PPPPSMLFFF LLLMLCTTSH CEARALRQSK RNSLMSVLFK LNFARAVEPT QPPPPPSSLD ASAGSDAASA SLAAVDAPFC VNPPDAPPSS
101: SSTPPFTSTA PSSTTPSVPD QLPPITPVPP SFEPSPPADG GGATPGSSPG LGTPASTPTP INPPQFAPSP PGTAPPSPIV VVPSPPDEFG PGSGGGGQGG
201: GVGGGGGGGG EGGGGGGGGG EGGGGGGGGV GGGGGGGLGE GGGGGGGGGG GFMPPIIYPP PLAPPMAPGS GQALWCVAKP TVPDPILQEA MDYACGSGAE
301: CRSIQPSGAC SQPDTVLAHA SYAFNSYWQM TRANGGTCDF GGTATIVTSD PSYDSCAFNL V
101: SSTPPFTSTA PSSTTPSVPD QLPPITPVPP SFEPSPPADG GGATPGSSPG LGTPASTPTP INPPQFAPSP PGTAPPSPIV VVPSPPDEFG PGSGGGGQGG
201: GVGGGGGGGG EGGGGGGGGG EGGGGGGGGV GGGGGGGLGE GGGGGGGGGG GFMPPIIYPP PLAPPMAPGS GQALWCVAKP TVPDPILQEA MDYACGSGAE
301: CRSIQPSGAC SQPDTVLAHA SYAFNSYWQM TRANGGTCDF GGTATIVTSD PSYDSCAFNL V
001: MRHLLYIFLF IAFLSFAGAG QESTPIEALN LNNNLLQLPQ TTDLDLAVSV SGNKTITEIS SSIIKAETWL KTHILSRYPS TKITTIVIFF PDSCQTTQHS
101: SDLVLSSLKN IYHSLTRWGL ENNIKVSSGF SYQCLNNPKS SEMFKPVLIF LKTINSTFTI NPPQNFLTSP HNHRDLLHSV EKLGSLSFNK VNFLNPEPEQ
201: ESTTTMTRRN LRSLVNLSSK FTTSFPTLPS PSPETSPIHS SIGSPSPPTI PYFPEPSQSP MESNQGISLP PCLPYHPAPS PQPVKKKNVE GLWCVAKPSV
301: AAETLQQSLD FACGQGGANC DEIKPHGICY YPDTVMAHAS YAFNSYWQKT KRNGGTCSFG GTAMLITTDP SYQHCRFVLS
101: SDLVLSSLKN IYHSLTRWGL ENNIKVSSGF SYQCLNNPKS SEMFKPVLIF LKTINSTFTI NPPQNFLTSP HNHRDLLHSV EKLGSLSFNK VNFLNPEPEQ
201: ESTTTMTRRN LRSLVNLSSK FTTSFPTLPS PSPETSPIHS SIGSPSPPTI PYFPEPSQSP MESNQGISLP PCLPYHPAPS PQPVKKKNVE GLWCVAKPSV
301: AAETLQQSLD FACGQGGANC DEIKPHGICY YPDTVMAHAS YAFNSYWQKT KRNGGTCSFG GTAMLITTDP SYQHCRFVLS
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FJX7]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.