Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G468800.1 | Wheat | extracellular | 92.24 | 90.99 |
| TraesCS7B01G384100.1 | Wheat | extracellular | 90.41 | 89.19 |
| HORVU7Hr1G108980.1 | Barley | extracellular | 89.95 | 88.34 |
| Os06t0665200-00 | Rice | cytosol | 55.25 | 56.54 |
| EER90180 | Sorghum | extracellular, plasma membrane | 54.34 | 53.36 |
| GSMUA_Achr8P33530_001 | Banana | cytosol, extracellular, plastid, vacuole | 34.25 | 36.41 |
| VIT_03s0017g02240.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 37.9 | 32.81 |
| PGSC0003DMT400025000 | Potato | nucleus | 38.81 | 30.58 |
| Solyc12g017360.1.1 | Tomato | cytosol, peroxisome, plastid | 39.73 | 29.49 |
| KRG90034 | Soybean | extracellular, plasma membrane | 36.99 | 27.36 |
| Solyc05g016390.2.1 | Tomato | endoplasmic reticulum, extracellular | 31.96 | 27.13 |
| KRH43685 | Soybean | plastid | 30.59 | 27.02 |
| TraesCS5A01G390800.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 16.89 | 26.62 |
| VIT_19s0085g00810.t01 | Wine grape | golgi, vacuole | 42.01 | 25.0 |
| TraesCS2A01G252300.1 | Wheat | extracellular | 19.63 | 24.86 |
| TraesCS5A01G456400.1 | Wheat | extracellular, plasma membrane | 20.55 | 24.73 |
| TraesCS7A01G346300.1 | Wheat | endoplasmic reticulum, plasma membrane | 19.18 | 23.6 |
| TraesCS2A01G425000.1 | Wheat | plastid | 38.36 | 23.27 |
| KRH13771 | Soybean | vacuole | 37.44 | 22.84 |
| CDY56795 | Canola | cytosol, nucleus, plastid, vacuole | 32.42 | 22.68 |
| Bra008414.1-P | Field mustard | cytosol, nucleus, plastid, vacuole | 33.33 | 22.6 |
| TraesCS5A01G393200.1 | Wheat | extracellular | 16.44 | 21.56 |
| CDX87377 | Canola | endoplasmic reticulum, extracellular, vacuole | 36.99 | 21.04 |
| CDX88545 | Canola | endoplasmic reticulum, extracellular, vacuole | 36.99 | 20.82 |
| Bra035122.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 36.99 | 20.72 |
| TraesCS1A01G420600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 25.11 | 20.45 |
| TraesCS3A01G302400.1 | Wheat | extracellular | 18.26 | 20.41 |
| TraesCS5A01G548300.1 | Wheat | plasma membrane | 17.81 | 19.9 |
| AT1G79480.1 | Thale cress | extracellular | 35.16 | 19.4 |
| TraesCS4A01G178000.1 | Wheat | extracellular, plasma membrane, vacuole | 28.31 | 18.79 |
| TraesCS6A01G110400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 16.89 | 18.78 |
| TraesCS5A01G365000.1 | Wheat | extracellular | 39.27 | 18.57 |
| TraesCS2A01G177600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 16.89 | 18.5 |
| TraesCS1A01G332500.1 | Wheat | extracellular | 16.89 | 17.7 |
| TraesCS3A01G227300.1 | Wheat | extracellular | 22.37 | 14.71 |
| TraesCS4A01G358500.1 | Wheat | extracellular | 26.94 | 14.39 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G481700.1 | EnsemblPlantsGene:TraesCS7A01G481700 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF98 | PFAM:PF07983 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr7A:+:674090641..674091714
Molecular Weight (calculated)
22535.8 Da
IEP (calculated)
5.580
GRAVY (calculated)
-0.120
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MMIKKDHLVL VALLVSIQHD WANGASRTRE WRNLVNSPAL PPYQDLVGGA GPPTPAHDIQ PSPPYCAYPP PANPTSPAAP SMPPPAGVLP PSTAPVGNPT
101: PPANAPASPR VAPPAGAPRA GGPAAIGAPQ GLWCVANPTV ESVDVQAAMD YACGSGTDCG MAAPGGPCYL PDTLMALASF AFNSYWQRNK AAGGTCDFAG
201: SAMLITKDPS YDECRYVYM
101: PPANAPASPR VAPPAGAPRA GGPAAIGAPQ GLWCVANPTV ESVDVQAAMD YACGSGTDCG MAAPGGPCYL PDTLMALASF AFNSYWQRNK AAGGTCDFAG
201: SAMLITKDPS YDECRYVYM
001: MRHLLYIFLF IAFLSFAGAG QESTPIEALN LNNNLLQLPQ TTDLDLAVSV SGNKTITEIS SSIIKAETWL KTHILSRYPS TKITTIVIFF PDSCQTTQHS
101: SDLVLSSLKN IYHSLTRWGL ENNIKVSSGF SYQCLNNPKS SEMFKPVLIF LKTINSTFTI NPPQNFLTSP HNHRDLLHSV EKLGSLSFNK VNFLNPEPEQ
201: ESTTTMTRRN LRSLVNLSSK FTTSFPTLPS PSPETSPIHS SIGSPSPPTI PYFPEPSQSP MESNQGISLP PCLPYHPAPS PQPVKKKNVE GLWCVAKPSV
301: AAETLQQSLD FACGQGGANC DEIKPHGICY YPDTVMAHAS YAFNSYWQKT KRNGGTCSFG GTAMLITTDP SYQHCRFVLS
101: SDLVLSSLKN IYHSLTRWGL ENNIKVSSGF SYQCLNNPKS SEMFKPVLIF LKTINSTFTI NPPQNFLTSP HNHRDLLHSV EKLGSLSFNK VNFLNPEPEQ
201: ESTTTMTRRN LRSLVNLSSK FTTSFPTLPS PSPETSPIHS SIGSPSPPTI PYFPEPSQSP MESNQGISLP PCLPYHPAPS PQPVKKKNVE GLWCVAKPSV
301: AAETLQQSLD FACGQGGANC DEIKPHGICY YPDTVMAHAS YAFNSYWQKT KRNGGTCSFG GTAMLITTDP SYQHCRFVLS
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FJX7]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.