Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G374100.1 | Wheat | extracellular, vacuole | 89.2 | 94.72 |
| TraesCS5B01G366600.1 | Wheat | plastid | 80.56 | 87.97 |
| HORVU5Hr1G089770.2 | Barley | plastid | 35.85 | 86.01 |
| GSMUA_Achr8P33530_001 | Banana | cytosol, extracellular, plastid, vacuole | 23.11 | 51.94 |
| Os09t0560850-00 | Rice | cytosol, endoplasmic reticulum, peroxisome | 59.18 | 47.16 |
| KXG36188 | Sorghum | cytosol, endoplasmic reticulum, vacuole | 54.64 | 46.68 |
| KRH43685 | Soybean | plastid | 24.84 | 46.37 |
| Zm00001d006343_P001 | Maize | endoplasmic reticulum, plastid, vacuole | 53.35 | 43.11 |
| VIT_19s0085g00810.t01 | Wine grape | golgi, vacuole | 31.97 | 40.22 |
| VIT_03s0017g02240.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 21.81 | 39.92 |
| TraesCS7A01G481700.1 | Wheat | extracellular | 18.57 | 39.27 |
| PGSC0003DMT400025000 | Potato | nucleus | 23.33 | 38.85 |
| Solyc12g017360.1.1 | Tomato | cytosol, peroxisome, plastid | 24.62 | 38.64 |
| Solyc05g016390.2.1 | Tomato | endoplasmic reticulum, extracellular | 20.3 | 36.43 |
| CDY56795 | Canola | cytosol, nucleus, plastid, vacuole | 24.41 | 36.1 |
| Bra008414.1-P | Field mustard | cytosol, nucleus, plastid, vacuole | 25.05 | 35.91 |
| KRG90034 | Soybean | extracellular, plasma membrane | 22.68 | 35.47 |
| KRH13771 | Soybean | vacuole | 26.78 | 34.54 |
| AT1G79480.1 | Thale cress | extracellular | 29.37 | 34.26 |
| TraesCS2A01G425000.1 | Wheat | plastid | 25.92 | 33.24 |
| CDX87377 | Canola | endoplasmic reticulum, extracellular, vacuole | 26.78 | 32.21 |
| CDX88545 | Canola | endoplasmic reticulum, extracellular, vacuole | 27.0 | 32.13 |
| Bra035122.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 26.57 | 31.46 |
| TraesCS5A01G390800.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 8.21 | 27.34 |
| TraesCS2A01G252300.1 | Wheat | extracellular | 9.5 | 25.43 |
| TraesCS5A01G393200.1 | Wheat | extracellular | 8.86 | 24.55 |
| TraesCS5A01G548300.1 | Wheat | plasma membrane | 10.15 | 23.98 |
| TraesCS5A01G456400.1 | Wheat | extracellular, plasma membrane | 9.07 | 23.08 |
| TraesCS7A01G346300.1 | Wheat | endoplasmic reticulum, plasma membrane | 8.86 | 23.03 |
| TraesCS4A01G178000.1 | Wheat | extracellular, plasma membrane, vacuole | 15.33 | 21.52 |
| TraesCS1A01G420600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 12.31 | 21.19 |
| TraesCS3A01G302400.1 | Wheat | extracellular | 8.86 | 20.92 |
| TraesCS6A01G110400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 8.86 | 20.81 |
| TraesCS1A01G332500.1 | Wheat | extracellular | 8.64 | 19.14 |
| TraesCS4A01G358500.1 | Wheat | extracellular | 16.41 | 18.54 |
| TraesCS2A01G177600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 7.99 | 18.5 |
| TraesCS3A01G227300.1 | Wheat | extracellular | 11.02 | 15.32 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G365000.1 | EnsemblPlantsGene:TraesCS5A01G365000 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF98 | PFAM:PF07983 |
| PRINTS:PR01217 | SEG:seg | SignalP:SignalP-TM | SMART:SM00768 | TMHMM:TMhelix | MapMan:35.1 |
Description
No Description!
Coordinates
chr5A:+:565393339..565395542
Molecular Weight (calculated)
45033.2 Da
IEP (calculated)
3.758
GRAVY (calculated)
-0.175
Length
463 amino acids
Sequence
(BLAST)
(BLAST)
001: MGECKSSRRP LLLAAIVVVL AFFVAQCGAR VLTVDELLDQ YSESDHHSAS PPPGSPGCAP EASPPPVIPA PSFAYLSPPP PMQFYSPPPP EVVPSPPEVT
101: PSPPEIVPSP PEITPSPPEI APLPPVVAPS PPEIAPLPPV VAPSPPEIAP LPPVVAPSPP EIAPLPPVVA PSPPEIAPLP PVVAXXXXXX XXXXXXXXXX
201: XXXXXXFPSP PEVTPLPPIV YPSPPEVAPS PPEVAPLPGP PEVTPSPPEV GPFPGPPEVT PSPPDVTPFP GPPEVTPSPP EVEPFPGPPE VTPSPPEVTP
301: FPGPPEVTPS PPEVTPFPSP PEVTPSPPDY APYPPPESSP GSGSGSSPSP PGGSFQPPVV LPPTTGPPSP SAGHAEWCVA KPSVPAAIVQ QAMDYACASG
401: ADCESLQADG ACFKPDTMTS HASYAFNSYW QRAKSTGATC DFGGTAMLIT KDPSYDNCHY SVM
101: PSPPEIVPSP PEITPSPPEI APLPPVVAPS PPEIAPLPPV VAPSPPEIAP LPPVVAPSPP EIAPLPPVVA PSPPEIAPLP PVVAXXXXXX XXXXXXXXXX
201: XXXXXXFPSP PEVTPLPPIV YPSPPEVAPS PPEVAPLPGP PEVTPSPPEV GPFPGPPEVT PSPPDVTPFP GPPEVTPSPP EVEPFPGPPE VTPSPPEVTP
301: FPGPPEVTPS PPEVTPFPSP PEVTPSPPDY APYPPPESSP GSGSGSSPSP PGGSFQPPVV LPPTTGPPSP SAGHAEWCVA KPSVPAAIVQ QAMDYACASG
401: ADCESLQADG ACFKPDTMTS HASYAFNSYW QRAKSTGATC DFGGTAMLIT KDPSYDNCHY SVM
001: MESYRVFTTI CLLLCLFLSA NFFTHYVDAR KSVGFEREPK KVMMIKALKH TSLLQKMMTQ LNLAQPLDYS SSSNTQPYGV STTLTLPPYV SLPPLSVPGN
101: APPFCINPPN TPPSSSYPGL SPPPGPITLP NPPDSSSNPN SNPNPPESSS NPNPPDSSSN PNSNPNPPVT VPNPPESSSN PNPPDSSSNP NSNPNPPESS
201: SNPNPPVTVP NPPESSSNPN PPESSSNPNP PITIPYPPES SSPNPPEIVP SPPESGYTPG PVLGPPYSEP GPSTPTGSIP SPSSGFLPPI VYPPPMAPPS
301: PSVTPTSAYW CVAKPSVPDP IIQEAMNFAC GSGADCHSIQ PNGPCFKPNT LWAHASFAYN SYWQRTKSTG GSCTFGGTGM LVTVDPSFNG CHFDFF
101: APPFCINPPN TPPSSSYPGL SPPPGPITLP NPPDSSSNPN SNPNPPESSS NPNPPDSSSN PNSNPNPPVT VPNPPESSSN PNPPDSSSNP NSNPNPPESS
201: SNPNPPVTVP NPPESSSNPN PPESSSNPNP PITIPYPPES SSPNPPEIVP SPPESGYTPG PVLGPPYSEP GPSTPTGSIP SPSSGFLPPI VYPPPMAPPS
301: PSVTPTSAYW CVAKPSVPDP IIQEAMNFAC GSGADCHSIQ PNGPCFKPNT LWAHASFAYN SYWQRTKSTG GSCTFGGTGM LVTVDPSFNG CHFDFF
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q5Q0D0]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.