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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX67775 Canola vacuole 97.23 96.34
Bra003363.1-P Field mustard vacuole 97.23 95.99
AT3G59080.1 Thale cress vacuole 87.27 88.41
CDY53652 Canola vacuole 70.11 73.08
CDX79836 Canola vacuole 69.93 72.61
PGSC0003DMT400095799 Potato vacuole 63.84 64.55
Solyc05g016310.1.1 Tomato vacuole 62.36 64.26
PGSC0003DMT400091831 Potato vacuole 64.02 63.44
VIT_12s0028g00610.t01 Wine grape extracellular 63.84 63.37
Solyc07g045100.1.1 Tomato vacuole 63.65 62.84
KRH46018 Soybean vacuole 62.73 61.04
KRG98962 Soybean vacuole 62.92 60.89
KRH73625 Soybean vacuole 61.99 59.89
GSMUA_Achr3P03130_001 Banana vacuole 52.03 53.92
GSMUA_Achr10P... Banana endoplasmic reticulum, vacuole 50.92 51.11
KRG98063 Soybean vacuole 50.37 50.93
TraesCS7D01G516100.1 Wheat vacuole 46.31 50.91
TraesCS7B01G444800.1 Wheat vacuole 46.13 50.61
TraesCS7A01G528000.1 Wheat vacuole 45.39 50.1
EER97501 Sorghum vacuole 47.79 50.1
Os02t0314600-01 Rice extracellular 47.05 49.61
Zm00001d022078_P001 Maize vacuole 46.49 49.22
TraesCS7A01G528200.1 Wheat vacuole 46.49 49.03
GSMUA_Achr6P13720_001 Banana vacuole 48.16 48.97
TraesCS7B01G445000.1 Wheat vacuole 45.39 48.62
TraesCS7D01G516400.1 Wheat vacuole 45.57 48.43
KRH30714 Soybean vacuole 48.34 48.25
Zm00001d006330_P001 Maize vacuole 44.65 47.45
EER97174 Sorghum vacuole 45.94 47.43
HORVU7Hr1G116780.2 Barley plastid 45.94 45.69
KRH14503 Soybean vacuole 61.25 45.42
Zm00001d040433_P001 Maize cytosol 23.62 35.85
HORVU7Hr1G116810.1 Barley plastid 23.25 35.39
CDY43952 Canola vacuole 29.34 32.92
CDX89133 Canola vacuole 29.15 32.71
CDX90023 Canola vacuole 28.97 32.64
CDY15187 Canola vacuole 28.78 32.43
CDX67868 Canola vacuole 28.97 32.37
CDY25081 Canola vacuole 28.41 31.75
CDY24395 Canola plasma membrane 28.23 31.74
CDY51131 Canola plasma membrane 25.28 31.42
CDY03848 Canola plasma membrane 28.04 31.34
CDX87358 Canola mitochondrion 23.43 30.98
CDX97055 Canola cytosol, plastid, vacuole 23.06 29.83
CDX85746 Canola vacuole 26.01 29.56
CDY40117 Canola extracellular, vacuole 26.01 29.56
CDX92240 Canola plastid 26.75 29.53
CDY24483 Canola vacuole 26.75 29.53
CDX69804 Canola vacuole 25.46 28.99
CDY69364 Canola endoplasmic reticulum, vacuole 26.75 28.94
CDY18523 Canola vacuole 26.57 28.86
CDX82342 Canola extracellular, vacuole 26.57 28.86
CDX75968 Canola extracellular, plasma membrane 26.57 28.63
CDY72573 Canola plastid, vacuole 22.88 28.51
CDX97054 Canola extracellular, plastid, vacuole 24.54 28.12
CDX97058 Canola cytosol, extracellular, nucleus 25.46 28.11
CDY70207 Canola plastid, vacuole 24.17 27.75
CDY24567 Canola extracellular, vacuole 20.11 27.59
CDY25371 Canola vacuole 20.11 27.46
CDX67980 Canola vacuole 24.35 27.1
CDX88562 Canola golgi, vacuole 23.99 26.69
CDX79338 Canola vacuole 23.62 26.28
CDX85747 Canola extracellular, vacuole 22.14 25.1
CDY40116 Canola extracellular 22.14 25.05
CDX69805 Canola cytosol 20.66 19.65
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10GO:A0A078EBG0InterPro:Aspartic_peptidase_A1InterPro:Aspartic_peptidase_ASEnsemblPlants:CDX98347
ProteinID:CDX98347ProteinID:CDX98347.1GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00105900001InterPro:IPR021109
InterPro:IPR033121InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543PRINTS:PR00792ScanProsite:PS00141
PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF250InterPro:Pepsin-like_plantInterPro:Peptidase_aspartic_dom_sfSUPFAM:SSF50630
SignalP:SignalP-noTMInterPro:TAXi_CInterPro:TAXi_NUniParc:UPI0004EE8219SEG:seg:
Description
BnaC06g17080D
Coordinates
chrLK031904:+:711600..713456
Molecular Weight (calculated)
60275.0 Da
IEP (calculated)
6.660
GRAVY (calculated)
-0.415
Length
542 amino acids
Sequence
(BLAST)
001: MLSKQSFILC LVFFSITAFS GDSRALAGNN EQKKNISGFS GFDFPNPMRF GSVSSSTSDD CGFSSPEKEP TKETTRENKN KTVKFHLKRR QATTKQETDK
101: TTKTNPVLEL QIKDLTRIQM LHIRVLEKKN QNTVSKPHKQ NKKNKKKEAV TSPVKEEKPR QLVATLESGM SLGSGEYFMD VLVGSPPKHF SLILDTGSDL
201: NWIQCLPCYD CFQQNGAFYD PTTSTSFKNI TCNDPRCNLV SSPDPPKPCK SDNQPCPYYY WYGDSSNTTG DFAVETFTVN LTTNGGSSEL YNVENMMFGC
301: GHWNRGLFHG AAGLLGLGRG PLSFSSQLQS LYGHSFSYCL VDRNSDANVS SKLIFGEDKD LLSHPNLNFT SFVAAKENLV ETFYYVQIKS ILVAGHVTNI
401: PEETWNISSD GGGGTIIDSG TTLSYFAEPA YELIKNKIAE EVKGKYPVYR DFPVLDPCFN VSGVDNVQLP ELGIEFADGA VWNFPTENSY IWLNEDLVCL
501: AILGTPKSAF SIIGNYQQQN FHVLYDTKRS RLGFAPTKCA DV
Best Arabidopsis Sequence Match ( AT3G59080.1 )
(BLAST)
001: MFSKYSFILC LIFFFVTAFS GDSRALAGNN EQKNISGFSG IDFPNPMRFG SASSSTSNDC GFSSPEKEPT KERTGENKTV KFHLKRRETT TTEKATTNSV
101: LELQIRDLTR IQTLHKRVLE KNNQNTVSQK QKKNDKEVVT TTPVASSVEE QAGQLVATLE SGMTLGSGEY FMDVLVGSPP KHFSLILDTG SDLNWIQCLP
201: CYDCFQQNGA FYDPKASASY KNITCNDQRC NLVSSPDPPM PCKSDNQSCP YYYWYGDSSN TTGDFAVETF TVNLTTNGGS SELYNVENMM FGCGHWNRGL
301: FHGAAGLLGL GRGPLSFSSQ LQSLYGHSFS YCLVDRNSDT NVSSKLIFGE DKDLLSHPNL NFTSFVAGKE NLVDTFYYVQ IKSILVAGEV LNIPEETWNI
401: SSDGAGGTII DSGTTLSYFA EPAYEFIKNK IAEKAKGKYP VYRDFPILDP CFNVSGIHNV QLPELGIAFA DGAVWNFPTE NSFIWLNEDL VCLAMLGTPK
501: SAFSIIGNYQ QQNFHILYDT KRSRLGYAPT KCADI
Arabidopsis Description
AT3g59080/F17J16_130 [Source:UniProtKB/TrEMBL;Acc:Q9LYS8]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.