CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010998.1-P	Field mustard	cytosol	72.2	96.94
CDY03848	Canola	plasma membrane	88.17	87.63
CDY51131	Canola	plasma membrane	79.05	87.39
AT1G25510.1	Thale cress	vacuole	82.37	82.19
VIT_01s0011g03210.t01	Wine grape	extracellular, vacuole	64.11	62.93
PGSC0003DMT400033734	Potato	vacuole	61.41	61.41
KRH75429	Soybean	plasma membrane, plastid, vacuole	61.2	60.95
KRH70570	Soybean	plastid	61.0	60.74
Solyc05g009680.1.1	Tomato	vacuole	60.58	60.58
GSMUA_Achr7P11900_001	Banana	vacuole	54.77	55.46
TraesCS3B01G064700.1	Wheat	endoplasmic reticulum, vacuole	56.02	53.68
TraesCS3A01G053600.1	Wheat	endoplasmic reticulum, vacuole	56.02	53.36
CDX92240	Canola	plastid	54.15	53.16
Os01t0140100-01	Rice	plastid	55.39	52.98
EES02514	Sorghum	endoplasmic reticulum, vacuole	55.81	52.85
CDY24483	Canola	vacuole	53.73	52.75
CDY18523	Canola	vacuole	53.94	52.1
Zm00001d039910_P001	Maize	vacuole	54.56	51.98
CDY69364	Canola	endoplasmic reticulum, vacuole	53.73	51.7
CDX82342	Canola	extracellular, vacuole	53.32	51.5
CDX75968	Canola	extracellular, plasma membrane	52.7	50.5
GSMUA_Achr4P24330_001	Banana	vacuole	44.19	49.65
HORVU3Hr1G009980.3	Barley	plastid	53.32	49.14
CDX90023	Canola	vacuole	47.51	47.61
CDX67868	Canola	vacuole	47.72	47.42
CDY15187	Canola	vacuole	47.3	47.4
CDY43952	Canola	vacuole	47.1	47.0
CDY25081	Canola	vacuole	47.1	46.8
CDX89133	Canola	vacuole	46.89	46.79
GSMUA_Achr10P...	Banana	plasma membrane, plastid, vacuole	55.81	44.39
CDY25371	Canola	vacuole	34.65	42.07
CDY24567	Canola	extracellular, vacuole	34.44	42.03
CDX97055	Canola	cytosol, plastid, vacuole	30.5	35.08
CDY40117	Canola	extracellular, vacuole	33.82	34.17
CDX85746	Canola	vacuole	33.82	34.17
CDX87358	Canola	mitochondrion	29.05	34.15
CDY70207	Canola	plastid, vacuole	33.2	33.9
CDX69804	Canola	vacuole	32.99	33.4
CDX97054	Canola	extracellular, plastid, vacuole	32.37	32.98
CDY72573	Canola	plastid, vacuole	29.46	32.64
CDX97058	Canola	cytosol, extracellular, nucleus	33.2	32.59
CDY40116	Canola	extracellular	29.46	29.65
CDX88562	Canola	golgi, vacuole	29.88	29.57
CDY53652	Canola	vacuole	31.74	29.42
CDX67980	Canola	vacuole	29.25	28.95
CDX79836	Canola	vacuole	31.33	28.93
CDX85747	Canola	extracellular, vacuole	28.63	28.87
CDX79338	Canola	vacuole	29.05	28.75
CDX98347	Canola	vacuole	31.74	28.23
CDX67775	Canola	vacuole	31.95	28.15
CDX69805	Canola	cytosol	28.01	23.68

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	GO:A0A078GD12	UniProt:A0A078GD12	InterPro:Aspartic_peptidase_A1	EnsemblPlants:CDY24395
ProteinID:CDY24395	ProteinID:CDY24395.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00026631001
InterPro:IPR021109	InterPro:IPR033121	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PFscan:PS51767
PANTHER:PTHR13683	PANTHER:PTHR13683:SF274	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C
InterPro:TAXi_N	UniParc:UPI0004EDB670	SEG:seg	:	:	:

Description

BnaCnng04620DBnaCnng04620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GD12]

Coordinates

chrLK032158:+:165286..166734

Molecular Weight (calculated)

51424.4 Da

IEP (calculated)

4.701

GRAVY (calculated)

-0.006

Length

482 amino acids

Sequence
(BLAST)

001: MCSHRCFLLL IFFLASHSSV ISRILPKISV TTTTTLDVTD SIRKTKDASS FRLNQQEEHS QYPTSSSFSL QLHSRASVRG TEHPDYNSLT LARLHRDSAR
101: VKSLTARLNL AINNITRADL KHTMYTTEQE EIEAPLISGT TQGSGEYFTR VGIGSPAREV YMVLDTGSDV NWLQCAPCAQ CYHQTEPIFE PTSSSSYATL
201: SCDAPQCKAL EASECRNATC LYEVSYGDGS YTAGDFATET FTIGSASVDN VAVGCGHSNQ GLFVGAAGLL GLGGGLLALP SQLNTTSFSY CLVDRDSDSS
301: STVEFGSDIP SDAVVAPLMR NHQLDTFYYL GLAGISVGGE MLEIPASSFE MDESGGGGVI IDSGTAVTRL QTGVYDSLRD AFVKGTTDLE RAAGVAMFDT
401: CYDLSGKTTI EVPSVAFHFP GGNMLALPAK NYMIPVDTVG TFCLAFAPTA SSLAIIGNVQ QQGTRVGFDL ANSLIGFSAN KC

Best Arabidopsis Sequence Match ( AT1G25510.1 )
(BLAST)

001: MSPNYSFFFF IFFLTSHSSV FSRILPETST TTTSILNVAD SIHRTKYTSS FRLNQQEEQT HSASSSFSLQ LHSRVSVRGT EHSDYKSLTL ARLNRDTARV
101: KSLITRLDLA INNISKADLK PISTMYTTEE QDIEAPLISG TTQGSGEYFT RVGIGKPARE VYMVLDTGSD VNWLQCTPCA DCYHQTEPIF EPSSSSSYEP
201: LSCDTPQCNA LEVSECRNAT CLYEVSYGDG SYTVGDFATE TLTIGSTLVQ NVAVGCGHSN EGLFVGAAGL LGLGGGLLAL PSQLNTTSFS YCLVDRDSDS
301: ASTVDFGTSL SPDAVVAPLL RNHQLDTFYY LGLTGISVGG ELLQIPQSSF EMDESGSGGI IIDSGTAVTR LQTEIYNSLR DSFVKGTLDL EKAAGVAMFD
401: TCYNLSAKTT VEVPTVAFHF PGGKMLALPA KNYMIPVDSV GTFCLAFAPT ASSLAIIGNV QQQGTRVTFD LANSLIGFSS NKC

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9C6M0]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.