CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY32970
CDY43592

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G18490.1	CDY32970	AT5G42980.1	15352244
AT3G18490.1	CDY43592	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82342	Canola	extracellular, vacuole	95.63	96.39
CDY69364	Canola	endoplasmic reticulum, vacuole	83.1	83.43
CDY18523	Canola	vacuole	82.7	83.37
CDX92240	Canola	plastid	79.52	81.47
AT3G18490.1	Thale cress	plastid	80.72	81.2
CDY24483	Canola	vacuole	78.73	80.65
KRH39233	Soybean	nucleus	59.64	60.98
VIT_17s0000g03990.t01	Wine grape	endoplasmic reticulum, plasma membrane	57.46	58.27
PGSC0003DMT400014352	Potato	endoplasmic reticulum, vacuole	54.87	56.79
PGSC0003DMT400010420	Potato	endoplasmic reticulum, plastid	52.88	54.18
GSMUA_Achr7P11900_001	Banana	vacuole	50.89	53.78
CDY51131	Canola	plasma membrane	46.12	53.21
CDY24395	Canola	plasma membrane	50.5	52.7
Solyc06g069220.1.1	Tomato	extracellular	51.69	52.53
CDY03848	Canola	plasma membrane	50.5	52.37
TraesCS3A01G053600.1	Wheat	endoplasmic reticulum, vacuole	52.29	51.98
TraesCS3B01G064700.1	Wheat	endoplasmic reticulum, vacuole	51.69	51.69
Solyc03g119690.1.1	Tomato	plastid	54.67	51.5
Zm00001d039910_P001	Maize	vacuole	51.69	51.38
Os01t0140100-01	Rice	plastid	51.29	51.19
EES02514	Sorghum	endoplasmic reticulum, vacuole	51.69	51.08
CDX90023	Canola	vacuole	46.72	48.86
CDY15187	Canola	vacuole	46.52	48.65
GSMUA_Achr4P24330_001	Banana	vacuole	41.35	48.48
CDX89133	Canola	vacuole	45.73	47.62
HORVU3Hr1G009980.3	Barley	plastid	49.11	47.23
CDX67868	Canola	vacuole	44.93	46.6
CDY43952	Canola	vacuole	44.73	46.58
CDY25081	Canola	vacuole	44.14	45.77
GSMUA_Achr10P...	Banana	plasma membrane, plastid, vacuole	53.08	44.06
CDY25371	Canola	vacuole	33.8	42.82
CDY24567	Canola	extracellular, vacuole	33.6	42.78
CDX97055	Canola	cytosol, plastid, vacuole	26.64	31.98
CDX87358	Canola	mitochondrion	25.25	30.98
CDX69804	Canola	vacuole	29.22	30.88
CDY70207	Canola	plastid, vacuole	28.83	30.72
CDX97054	Canola	extracellular, plastid, vacuole	28.83	30.66
CDY72573	Canola	plastid, vacuole	26.24	30.34
CDY40117	Canola	extracellular, vacuole	28.43	29.98
CDX85746	Canola	vacuole	28.43	29.98
CDX97058	Canola	cytosol, extracellular, nucleus	29.03	29.74
CDY53652	Canola	vacuole	29.42	28.46
CDX67980	Canola	vacuole	27.44	28.34
CDX79836	Canola	vacuole	29.22	28.16
CDX79338	Canola	vacuole	27.04	27.93
CDX88562	Canola	golgi, vacuole	26.84	27.72
CDY40116	Canola	extracellular	25.84	27.14
CDX67775	Canola	vacuole	29.22	26.87
CDX98347	Canola	vacuole	28.63	26.57
CDX85747	Canola	extracellular, vacuole	24.85	26.15
CDX69805	Canola	cytosol	24.45	21.58

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	GO:A0A078CLM2	InterPro:ASPG1	InterPro:Aspartic_peptidase_A1	EnsemblPlants:CDX75968
ProteinID:CDX75968	ProteinID:CDX75968.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0006508
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009414	GO:GO:0009628	GO:GO:0009719
GO:GO:0009737	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00124002001	InterPro:IPR021109	InterPro:IPR033121
InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF531
InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI0004EEF6D2
SEG:seg	:	:	:	:	:

Description

BnaC03g40510D

Coordinates

chrLK031805:-:2230260..2231869

Molecular Weight (calculated)

53805.1 Da

IEP (calculated)

4.666

GRAVY (calculated)

-0.058

Length

503 amino acids

Sequence
(BLAST)

001: MALARFFSLL SVITLSLFLF ASNASSRSLS TPHKTTVLNV ASSLQQTQHI LSIDPTRSSL TTTTRPEFES KSIPFFPNSS SPLTLELHSR DTLLAPHHKD
101: YKSLVLSRLE RDSSRVAAIA AKVRFSVEGV NRSDLKPVYN DETMYNPEEL TTPVVSGASQ GSGEYFSRIG VGTPAKEMYM VLDTGSDVNW LQCKPCSDCY
201: EQSDPVFDPA ESSTYKPLTC AAPQCASLEV STCRSNKCLY QVSYGDGSFT VGEYATDTVT FGDSGKVNDV ALGCGHDNEG LFMGAAGLLG LGGGALSMTN
301: QINATSFSYC LVDRDSGNSS SLDFNSVQIG DGDATAPLLL NKKIDTFYYV GLSGFSVGGE KVEIPSSVFE VDAAGAGGVI LDCGTAVTRL QTEAYNALRD
401: AFVKLAKDFK NATSSISLFD TCYDFSSMSS VNVPTVAFHF TGGKSIDLPA KNYLIPIDDA GTFCFAFAPT SSELSIIGNV QQQGTRITYN LENNLIGLSA
501: NKC

Best Arabidopsis Sequence Match ( AT3G18490.1 )
(BLAST)

001: MAFPRFLSLL AVVTLSLFLT TTDASSRSLS TPPKTNVLDV VSSLQQTQTI LSLDPTRSSL TTTKPESLSD PVFFNSSSPL SLELHSRDTF VASQHKDYKS
101: LTLSRLERDS SRVAGIVAKI RFAVEGVDRS DLKPVYNEDT RYQTEDLTTP VVSGASQGSG EYFSRIGVGT PAKEMYLVLD TGSDVNWIQC EPCADCYQQS
201: DPVFNPTSSS TYKSLTCSAP QCSLLETSAC RSNKCLYQVS YGDGSFTVGE LATDTVTFGN SGKINNVALG CGHDNEGLFT GAAGLLGLGG GVLSITNQMK
301: ATSFSYCLVD RDSGKSSSLD FNSVQLGGGD ATAPLLRNKK IDTFYYVGLS GFSVGGEKVV LPDAIFDVDA SGSGGVILDC GTAVTRLQTQ AYNSLRDAFL
401: KLTVNLKKGS SSISLFDTCY DFSSLSTVKV PTVAFHFTGG KSLDLPAKNY LIPVDDSGTF CFAFAPTSSS LSIIGNVQQQ GTRITYDLSK NVIGLSGNKC

Arabidopsis Description

ASPG1Protein ASPARTIC PROTEASE IN GUARD CELL 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS40]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.