Factsheet for Solyc03g119690.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
vacuole 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

plastid: 20363867
nucleus: 28394025
extracellular: 29876421

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400014352	Potato	endoplasmic reticulum, vacuole	87.45	96.09
Solyc06g069220.1.1	Tomato	extracellular	59.74	64.44
VIT_17s0000g03990.t01	Wine grape	endoplasmic reticulum, plasma membrane	55.62	59.88
KRH39233	Soybean	nucleus	53.93	58.54
Bra037580.1-P	Field mustard	vacuole	53.75	57.52
CDY18523	Canola	vacuole	53.75	57.52
CDY69364	Canola	endoplasmic reticulum, vacuole	53.75	57.29
CDY24483	Canola	vacuole	52.62	57.23
Solyc05g009680.1.1	Tomato	vacuole	51.31	56.85
CDX92240	Canola	plastid	52.25	56.82
Bra022325.1-P	Field mustard	plastid	52.25	56.82
AT3G18490.1	Thale cress	plastid	52.43	56.0
CDX75968	Canola	extracellular, plasma membrane	51.5	54.67
GSMUA_Achr7P11900_001	Banana	vacuole	48.69	54.62
CDX82342	Canola	extracellular, vacuole	50.94	54.51
Bra001707.1-P	Field mustard	extracellular, vacuole	50.75	54.31
Zm00001d039910_P001	Maize	vacuole	48.69	51.38
EES02514	Sorghum	endoplasmic reticulum, vacuole	48.5	50.88
Os01t0140100-01	Rice	plastid	47.94	50.79
TraesCS3B01G064700.1	Wheat	endoplasmic reticulum, vacuole	47.38	50.3
TraesCS3A01G053600.1	Wheat	endoplasmic reticulum, vacuole	47.19	49.8
GSMUA_Achr4P24330_001	Banana	vacuole	38.95	48.48
Solyc10g009410.1.1	Tomato	extracellular	39.7	46.29
HORVU3Hr1G009980.3	Barley	plastid	44.76	45.7
Solyc01g096040.2.1	Tomato	nucleus, plastid	40.82	45.32
GSMUA_Achr10P...	Banana	plasma membrane, plastid, vacuole	47.57	41.91
Solyc04g008850.1.1	Tomato	extracellular	35.77	39.87
Solyc08g067100.2.1	Tomato	extracellular, plastid	29.4	31.34
Solyc06g068550.2.1	Tomato	extracellular	25.09	28.39
Solyc05g016310.1.1	Tomato	vacuole	27.9	28.33
Solyc03g117690.2.1	Tomato	vacuole	24.91	27.94
Solyc07g045100.1.1	Tomato	vacuole	28.09	27.32

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	MEROPS:A01.050	InterPro:ASPG1	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS
InterPro:CND41-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0006508
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009414
GO:GO:0009628	GO:GO:0009719	GO:GO:0009737	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019538	GO:GO:0030163	InterPro:IPR021109	InterPro:IPR033121	UniProt:K4BMB8	InterPro:PEPTIDASE_A1
PFAM:PF14541	PFAM:PF14543	ScanProsite:PS00141	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF531
InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	EnsemblPlantsGene:Solyc03g119690.1	EnsemblPlants:Solyc03g119690.1.1	InterPro:TAXi_C	InterPro:TAXi_N
TMHMM:TMhelix	UniParc:UPI00027667AF	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3:-:68240221..68241825

Molecular Weight (calculated)

57653.2 Da

IEP (calculated)

7.279

GRAVY (calculated)

0.028

Length

534 amino acids

Sequence
(BLAST)

001: MLLYGFNKSD VSPLPSFYFP SSLGFSLLYI YSLLHFLFIH SSNFHFKKMA QFCLFLLLIS LVSVPCVLSR SLSSSSHPHT QIFDVAASIE KTVQVLTPAT
101: QSFQQEAIKS AHFNSSSISV SIYPRSALVK PRHKDYAALT LSRLERDSAR VSSLTMKLHL ALNNFNHSDL KPVETMVQPE DLQTPITSGA RQGSGEYFTR
201: LGLGQPVKQY YMVLDTGSDI TWVQCEPCSD CYQQSDPIFS PSSSSTYSRL SCDAAQCSAL EVSACASSQS CLYQVSYGDG SFTVGEFATE TVSFGDSGSF
301: SEVAIGCGHD NEGLFVGAAG LIALGGGSLS LPTQIKASSF SYCFVDRDSA SSSTLDFNSA RPGDSVIAPL LRNSRRSTFF YVGLTGISVG GQMLSIPASV
401: FQVDRSGSGG IIVDSGTAVT RLKNTAYNTL RDSFRKYTQH LPSAGQFALF DTCYDLSSMK RASVPTLSFH FSGGKALPLH PKNYLIPVDS SGKFCLAFAP
501: TDGSLSIIGN IQQQGTRVSY DLANNLVGFS PDKC

Best Arabidopsis Sequence Match ( AT3G18490.1 )
(BLAST)

001: MAFPRFLSLL AVVTLSLFLT TTDASSRSLS TPPKTNVLDV VSSLQQTQTI LSLDPTRSSL TTTKPESLSD PVFFNSSSPL SLELHSRDTF VASQHKDYKS
101: LTLSRLERDS SRVAGIVAKI RFAVEGVDRS DLKPVYNEDT RYQTEDLTTP VVSGASQGSG EYFSRIGVGT PAKEMYLVLD TGSDVNWIQC EPCADCYQQS
201: DPVFNPTSSS TYKSLTCSAP QCSLLETSAC RSNKCLYQVS YGDGSFTVGE LATDTVTFGN SGKINNVALG CGHDNEGLFT GAAGLLGLGG GVLSITNQMK
301: ATSFSYCLVD RDSGKSSSLD FNSVQLGGGD ATAPLLRNKK IDTFYYVGLS GFSVGGEKVV LPDAIFDVDA SGSGGVILDC GTAVTRLQTQ AYNSLRDAFL
401: KLTVNLKKGS SSISLFDTCY DFSSLSTVKV PTVAFHFTGG KSLDLPAKNY LIPVDDSGTF CFAFAPTSSS LSIIGNVQQQ GTRITYDLSK NVIGLSGNKC

Arabidopsis Description

ASPG1Protein ASPARTIC PROTEASE IN GUARD CELL 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS40]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.