Factsheet for VIT_17s0000g03990.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 7
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0011g03210.t01	Wine grape	extracellular, vacuole	63.1	63.75
PGSC0003DMT400014352	Potato	endoplasmic reticulum, vacuole	61.69	62.96
KRH39233	Soybean	nucleus	62.3	62.8
CDX92240	Canola	plastid	58.87	59.47
Bra022325.1-P	Field mustard	plastid	58.67	59.27
CDY24483	Canola	vacuole	58.67	59.27
CDY69364	Canola	endoplasmic reticulum, vacuole	59.48	58.88
Bra037580.1-P	Field mustard	vacuole	59.07	58.72
CDY18523	Canola	vacuole	59.07	58.72
CDX82342	Canola	extracellular, vacuole	58.06	57.72
Bra001707.1-P	Field mustard	extracellular, vacuole	57.86	57.52
CDX75968	Canola	extracellular, plasma membrane	58.27	57.46
AT3G18490.1	Thale cress	plastid	57.66	57.2
Solyc06g069220.1.1	Tomato	extracellular	56.85	56.97
PGSC0003DMT400010420	Potato	endoplasmic reticulum, plastid	56.25	56.82
GSMUA_Achr7P11900_001	Banana	vacuole	53.63	55.88
Solyc03g119690.1.1	Tomato	plastid	59.88	55.62
Os01t0140100-01	Rice	plastid	53.23	52.38
EES02514	Sorghum	endoplasmic reticulum, vacuole	53.43	52.06
TraesCS3B01G064700.1	Wheat	endoplasmic reticulum, vacuole	52.22	51.49
TraesCS3A01G053600.1	Wheat	endoplasmic reticulum, vacuole	52.42	51.38
Zm00001d039910_P001	Maize	vacuole	52.42	51.38
GSMUA_Achr4P24330_001	Banana	vacuole	43.55	50.35
HORVU3Hr1G009980.3	Barley	plastid	50.0	47.42
VIT_15s0046g00360.t01	Wine grape	extracellular	44.15	44.79
GSMUA_Achr10P...	Banana	plasma membrane, plastid, vacuole	54.44	44.55
VIT_10s0071g00770.t01	Wine grape	extracellular	39.72	41.13
VIT_04s0008g07080.t01	Wine grape	extracellular	31.45	36.11
VIT_00s1206g00010.t01	Wine grape	plastid	22.38	33.95
VIT_04s0008g07110.t01	Wine grape	extracellular	30.24	31.18
VIT_09s0018g01670.t01	Wine grape	vacuole	29.23	30.46
VIT_00s0429g00040.t01	Wine grape	extracellular	18.15	30.41
VIT_12s0028g00610.t01	Wine grape	extracellular	32.06	29.12

Protein Annotations

EntrezGene:100242440	wikigene:100242440	MapMan:19.4.3.1	Gene3D:2.40.70.10	MEROPS:A01.A09	InterPro:ASPG1
InterPro:Aspartic_peptidase_A1	ProteinID:CCB43201	ProteinID:CCB43201.1	UniProt:F6GTJ2	EMBL:FN594950	GO:GO:0003674
GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0006508	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0009056	GO:GO:0009414	GO:GO:0009605	GO:GO:0009607	GO:GO:0009627	GO:GO:0009628
GO:GO:0009719	GO:GO:0009737	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	GO:GO:0070001
InterPro:IPR021109	InterPro:IPR033121	EntrezGene:LOC100242440	wikigene:LOC100242440	InterPro:PEPTIDASE_A1	PFAM:PF14541
PFAM:PF14543	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF531	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630
SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	TIGR:TC61840	TMHMM:TMhelix	UniParc:UPI00015C9E28
ArrayExpress:VIT_17s0000g03990	EnsemblPlantsGene:VIT_17s0000g03990	EnsemblPlants:VIT_17s0000g03990.t01	unigene:Vvi.12905	RefSeq:XP_002275164	RefSeq:XP_002275164.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr17:-:4010086..4011979

Molecular Weight (calculated)

53086.4 Da

IEP (calculated)

5.926

GRAVY (calculated)

-0.064

Length

496 amino acids

Sequence
(BLAST)

001: MADKFFIFSI FAAFALSLSP FVFSRELSLD TDSHSSVLDV SGSIRKTLDV LSHKSSVSKP SDQRDEKTTS FSPTSLASSF SLELHPRELL HGGSHKDYRA
101: LMLSRLARDS ARVKAINTKL QLAVSGTDKS DLVPMDTEIL HPQDFSTPVT SGTSQGSGEY FLRVGIGRPS KTFYMVIDTG SDVNWLQCKP CDDCYQQVDP
201: IFDPASSSSF SRLGCQTPQC RNLDVFACRN DSCLYQVSYG DGSYTVGDFA TETVSFGNSG SVDKVAIGCG HDNEGLFVGA AGLIGLGGGP LSLTSQIKAS
301: SFSYCLVNRD SVDSSTLEFN SAKPSDSVTA PIFKNSKVDT FYYVGITGMS VGGEKLAIPP SIFEVDGSGK GGIIVDCGTA VTRLQTQAYN ALRDTFVKLT
401: KDLPSTSGFA LFDTCYNLSS RTSVRVPTVA FLFDGGKSLP LPPSNYLIPV DSAGTFCLAF APTTASLSII GNVQQQGTRV TYDLANSQVS FSSRKC

Best Arabidopsis Sequence Match ( AT1G25510.1 )
(BLAST)

001: MSPNYSFFFF IFFLTSHSSV FSRILPETST TTTSILNVAD SIHRTKYTSS FRLNQQEEQT HSASSSFSLQ LHSRVSVRGT EHSDYKSLTL ARLNRDTARV
101: KSLITRLDLA INNISKADLK PISTMYTTEE QDIEAPLISG TTQGSGEYFT RVGIGKPARE VYMVLDTGSD VNWLQCTPCA DCYHQTEPIF EPSSSSSYEP
201: LSCDTPQCNA LEVSECRNAT CLYEVSYGDG SYTVGDFATE TLTIGSTLVQ NVAVGCGHSN EGLFVGAAGL LGLGGGLLAL PSQLNTTSFS YCLVDRDSDS
301: ASTVDFGTSL SPDAVVAPLL RNHQLDTFYY LGLTGISVGG ELLQIPQSSF EMDESGSGGI IIDSGTAVTR LQTEIYNSLR DSFVKGTLDL EKAAGVAMFD
401: TCYNLSAKTT VEVPTVAFHF PGGKMLALPA KNYMIPVDSV GTFCLAFAPT ASSLAIIGNV QQQGTRVTFD LANSLIGFSS NKC

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9C6M0]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.