Factsheet for VIT_09s0018g01670.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035139.1-P	Field mustard	plastid	29.62	65.89
KRH47308	Soybean	extracellular	65.34	64.66
KRH44589	Soybean	extracellular, vacuole	64.29	63.49
CDX87358	Canola	mitochondrion	53.78	62.44
PGSC0003DMT400036706	Potato	vacuole	61.34	61.6
PGSC0003DMT400074390	Potato	vacuole	60.08	60.98
Solyc03g117690.2.1	Tomato	vacuole	60.5	60.5
Solyc06g068550.2.1	Tomato	extracellular	59.45	59.96
KRH09627	Soybean	vacuole	58.61	59.36
CDX79338	Canola	vacuole	60.71	59.34
Bra003596.1-P	Field mustard	vacuole	60.5	59.14
CDX67980	Canola	vacuole	60.08	58.73
GSMUA_Achr4P04280_001	Banana	cytosol	32.35	58.56
AT1G79720.1	Thale cress	extracellular, golgi, vacuole	59.03	58.06
KRH57273	Soybean	endoplasmic reticulum, golgi	34.24	56.99
CDX88562	Canola	golgi, vacuole	57.77	56.47
Os09t0423500-01	Rice	endoplasmic reticulum, vacuole	51.68	52.01
TraesCS5B01G220700.1	Wheat	endoplasmic reticulum	48.95	50.65
TraesCS5D01G229700.1	Wheat	endoplasmic reticulum, golgi	48.53	50.0
TraesCS5A01G221900.1	Wheat	endoplasmic reticulum, golgi	48.53	50.0
GSMUA_Achr9P22770_001	Banana	cytosol, golgi, mitochondrion, peroxisome	31.93	49.51
GSMUA_Achr5P16410_001	Banana	cytosol	40.97	49.37
HORVU5Hr1G064080.3	Barley	endoplasmic reticulum, golgi	48.11	49.35
EER96754	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	50.0	46.48
Zm00001d020536_P001	Maize	extracellular	48.11	45.8
TraesCS5D01G386300.1	Wheat	plastid, vacuole	47.48	43.8
HORVU5Hr1G093290.1	Barley	mitochondrion, vacuole	47.06	43.66
Os08t0267300-00	Rice	plasma membrane, vacuole	47.48	43.13
TraesCS5B01G379900.1	Wheat	mitochondrion	48.11	40.89
EES14825	Sorghum	plastid	46.64	40.88
VIT_04s0008g07080.t01	Wine grape	extracellular	36.76	40.51
TraesCS5A01G376300.1	Wheat	extracellular, plastid, vacuole	47.27	40.25
VIT_00s1206g00010.t01	Wine grape	plastid	27.31	39.76
VIT_04s0008g07110.t01	Wine grape	extracellular	38.03	37.63
Zm00001d050178_P001	Maize	plasma membrane	46.22	37.61
VIT_00s0429g00040.t01	Wine grape	extracellular	19.54	31.42
VIT_15s0046g00360.t01	Wine grape	extracellular	30.46	29.65
VIT_17s0000g03990.t01	Wine grape	endoplasmic reticulum, plasma membrane	30.46	29.23
VIT_10s0071g00770.t01	Wine grape	extracellular	29.41	29.23
VIT_01s0011g03210.t01	Wine grape	extracellular, vacuole	29.62	28.72
VIT_12s0028g00610.t01	Wine grape	extracellular	26.89	23.44

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	MEROPS:A01.A07	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS	ProteinID:CCB49720
ProteinID:CCB49720.1	InterPro:CND41-like	ncoils:Coil	UniProt:F6HBY7	EMBL:FN595513	GO:GO:0003674
GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0009056	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	InterPro:IPR021109	InterPro:IPR033121
InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	ScanProsite:PS00141	PFscan:PS51767	PANTHER:PTHR13683
PANTHER:PTHR13683:SF263	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N
TIGR:TC68568	TMHMM:TMhelix	UniParc:UPI0001983F86	ArrayExpress:VIT_09s0018g01670	EnsemblPlantsGene:VIT_09s0018g01670	EnsemblPlants:VIT_09s0018g01670.t01
unigene:Vvi.19038	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr9:-:18973161..18975234

Molecular Weight (calculated)

51869.3 Da

IEP (calculated)

7.471

GRAVY (calculated)

-0.036

Length

476 amino acids

Sequence
(BLAST)

001: MVDPTPSVPF ILLSLLLLGL GNGVVCLEEK RVLSLQKVQP KLQSTDTSCF SQKSRREMGA TILEMKHRDH CSGVTRDWNE KLQKRLTMDA ERVKSLQSRI
101: KRTVPSNTED VSNAQIPVTS GIELETLNYI VTVELGARKM TVIVDTGSDL TWVQCQPCDS CYNQRDPVFK PSTSPSYQPI LCNASACQSL QFATGNSGVC
201: GSAAPICNYA INYGDGSFTR GELGHEKLKF GTILVKDFIF GCGRNNKGLF GGVSGLMGLG RSDLSLISQT SGIFGGVFSY CLPSTERKGS GSLILGGNSS
301: VYRNSSPISY AKMIENPQLY NFYFINLTGI SIGGVALQAP SVGPSRILVD SGTVITRLPP TIYKALKAEF LKQFTGFPPA PAFSILDTCF NLSAYQEVDI
401: PTIKMHFEGN AELTVDVTGV FYFVKSDASQ VCLALASLEY QDEVAILGNY QQKNLRVIYD TKETKVGFAL ETCSFE

Best Arabidopsis Sequence Match ( AT1G79720.1 )
(BLAST)

001: MFKKATLNLS LAPLLLVFLF LLSCVVHGVD EKKILSVHNN IWSPKKSYEA STSCFSRSLG KGRESTTLEM KHRELCSGKT IDLGKKMRRA LVLDNIRVQS
101: LQLKIKAMTS STTEQSVSET QIPLTSGIKL ESLNYIVTVE LGGKNMSLIV DTGSDLTWVQ CQPCRSCYNQ QGPLYDPSVS SSYKTVFCNS STCQDLVAAT
201: SNSGPCGGNN GVVKTPCEYV VSYGDGSYTR GDLASESILL GDTKLENFVF GCGRNNKGLF GGSSGLMGLG RSSVSLVSQT LKTFNGVFSY CLPSLEDGAS
301: GSLSFGNDSS VYTNSTSVSY TPLVQNPQLR SFYILNLTGA SIGGVELKSS SFGRGILIDS GTVITRLPPS IYKAVKIEFL KQFSGFPTAP GYSILDTCFN
401: LTSYEDISIP IIKMIFQGNA ELEVDVTGVF YFVKPDASLV CLALASLSYE NEVGIIGNYQ QKNQRVIYDT TQERLGIVGE NCRV

Arabidopsis Description

At1g79720 [Source:UniProtKB/TrEMBL;Acc:Q8RX60]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.