CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plasma membrane, endoplasmic reticulum

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 7
endoplasmic reticulum 6
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020536_P001	Maize	extracellular	83.01	85.0
TraesCS5B01G220700.1	Wheat	endoplasmic reticulum	72.46	80.65
HORVU5Hr1G064080.3	Barley	endoplasmic reticulum, golgi	72.46	79.96
Os09t0423500-01	Rice	endoplasmic reticulum, vacuole	73.83	79.92
TraesCS5D01G229700.1	Wheat	endoplasmic reticulum, golgi	70.51	78.14
TraesCS5A01G221900.1	Wheat	endoplasmic reticulum, golgi	69.92	77.49
Bra035139.1-P	Field mustard	plastid	23.83	57.01
CDX87358	Canola	mitochondrion	41.6	51.95
GSMUA_Achr5P16410_001	Banana	cytosol	39.84	51.65
VIT_09s0018g01670.t01	Wine grape	vacuole	46.48	50.0
PGSC0003DMT400036706	Potato	vacuole	45.7	49.37
PGSC0003DMT400074390	Potato	vacuole	44.92	49.04
Solyc03g117690.2.1	Tomato	vacuole	45.51	48.95
KRH47308	Soybean	extracellular	45.7	48.65
KRH44589	Soybean	extracellular, vacuole	45.51	48.34
Solyc06g068550.2.1	Tomato	extracellular	44.53	48.31
KRH09627	Soybean	vacuole	43.75	47.66
Bra003596.1-P	Field mustard	vacuole	44.53	46.82
CDX67980	Canola	vacuole	44.34	46.61
CDX79338	Canola	vacuole	44.34	46.61
AT1G79720.1	Thale cress	extracellular, golgi, vacuole	43.75	46.28
KRH57273	Soybean	endoplasmic reticulum, golgi	25.59	45.8
CDX88562	Canola	golgi, vacuole	43.36	45.59
EES14825	Sorghum	plastid	48.05	45.3
EES07336	Sorghum	vacuole	33.59	36.91
EES05617	Sorghum	endoplasmic reticulum, vacuole	33.2	36.48
EES07353	Sorghum	extracellular, vacuole	33.59	36.29
EES07349	Sorghum	vacuole	32.42	36.24
EER96952	Sorghum	mitochondrion	33.4	35.55
EES07335	Sorghum	vacuole	31.84	35.43
OQU76291	Sorghum	vacuole	32.42	35.32
EER89658	Sorghum	vacuole	31.45	34.7
EES06163	Sorghum	vacuole	33.2	34.48
KXG19878	Sorghum	vacuole	30.66	34.43
EES03312	Sorghum	extracellular	30.66	33.55
EER96951	Sorghum	endoplasmic reticulum	31.84	33.4
EER88640	Sorghum	extracellular, plasma membrane, vacuole	32.62	33.2
OQU76292	Sorghum	plasma membrane, plastid, vacuole	31.05	32.65
OQU76307	Sorghum	endoplasmic reticulum, extracellular, vacuole	29.69	32.41
EER88307	Sorghum	endoplasmic reticulum, extracellular, vacuole	29.3	32.26
EES02514	Sorghum	endoplasmic reticulum, vacuole	32.03	32.22
EER88303	Sorghum	vacuole	29.3	31.98
OQU82570	Sorghum	endoplasmic reticulum, vacuole	27.73	30.47
KXG22664	Sorghum	extracellular, plastid, vacuole	29.69	30.34
OQU84087	Sorghum	endoplasmic reticulum, vacuole	28.71	28.88
KXG33265	Sorghum	vacuole	25.59	28.79
EES01017	Sorghum	mitochondrion, plastid	29.1	28.76
OQU92922	Sorghum	vacuole	27.15	28.37
EER89096	Sorghum	plasma membrane, vacuole	26.76	28.19
EER97501	Sorghum	vacuole	28.32	28.05
KXG24092	Sorghum	vacuole	26.56	27.64
EES16428	Sorghum	extracellular	26.56	27.53
OQU79707	Sorghum	vacuole	26.95	27.44
KXG24090	Sorghum	extracellular	26.37	27.27
EER97174	Sorghum	vacuole	27.93	27.24
KXG19867	Sorghum	golgi	29.49	26.87
EER89099	Sorghum	plastid	25.2	24.71

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	EntrezGene:8055992	InterPro:Aspartic_peptidase_A1	UniProt:C5XCX8	InterPro:CND41-like
EnsemblPlants:EER96754	ProteinID:EER96754	ProteinID:EER96754.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0016787
GO:GO:0019538	GO:GO:0030163	InterPro:IPR021109	InterPro:IPR033121	InterPro:PEPTIDASE_A1	PFAM:PF14541
PFAM:PF14543	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF263	InterPro:Peptidase_aspartic_dom_sf	EnsemblPlantsGene:SORBI_3002G206100
SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	TMHMM:TMhelix	UniParc:UPI0001A83B7F
RefSeq:XP_002460233.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:59753909..59756403

Molecular Weight (calculated)

53521.9 Da

IEP (calculated)

5.562

GRAVY (calculated)

-0.007

Length

512 amino acids

Sequence
(BLAST)

001: MAWGACTAAL LLLLLLAAAA ATAAAGGNGG GVHCLHLEED GSRHRHQHHL SRRALRQGRQ RHPHHLRSRA VGGATVLELR HRSFSSAPPA SSREEEVDGL
101: LSTDAARVSS LQRRIDRYRR LMITSSAEVA VAVAASKAQV PVTSGAKLRT LNYVATVGLG GGEATVIVDT ASELTWVQCA PCESCHDQQD PLFDPSSSPS
201: YAAVPCNSSS CDALQLATGG TSGGAAACQG QDQSAAACSY TLSYRDGSYS RGVLAHDRLS LAGEVIDGFV FGCGTSNQGP PFGGTSGLMG LGRSQLSLVS
301: QTMDQFGGVF SYCLPLKESD SSGSLVIGDD SSVYRNSTPI VYASMVSDPL QGPFYFVNLT GITVGGQEVE SSGFSSGGGG GKAIIDSGTV ITSLVPSIYN
401: AVKAEFLSQF AEYPQAPGFS ILDTCFNMTG LREVQVPSLK LVFDGGVEVE VDSGGVLYFV SSDSSQVCLA MAPLKSEYET NIIGNYQQKN LRVIFDTSGS
501: QVGFAQETCG YI

Best Arabidopsis Sequence Match ( AT1G79720.1 )
(BLAST)

001: MFKKATLNLS LAPLLLVFLF LLSCVVHGVD EKKILSVHNN IWSPKKSYEA STSCFSRSLG KGRESTTLEM KHRELCSGKT IDLGKKMRRA LVLDNIRVQS
101: LQLKIKAMTS STTEQSVSET QIPLTSGIKL ESLNYIVTVE LGGKNMSLIV DTGSDLTWVQ CQPCRSCYNQ QGPLYDPSVS SSYKTVFCNS STCQDLVAAT
201: SNSGPCGGNN GVVKTPCEYV VSYGDGSYTR GDLASESILL GDTKLENFVF GCGRNNKGLF GGSSGLMGLG RSSVSLVSQT LKTFNGVFSY CLPSLEDGAS
301: GSLSFGNDSS VYTNSTSVSY TPLVQNPQLR SFYILNLTGA SIGGVELKSS SFGRGILIDS GTVITRLPPS IYKAVKIEFL KQFSGFPTAP GYSILDTCFN
401: LTSYEDISIP IIKMIFQGNA ELEVDVTGVF YFVKPDASLV CLALASLSYE NEVGIIGNYQ QKNQRVIYDT TQERLGIVGE NCRV

Arabidopsis Description

At1g79720 [Source:UniProtKB/TrEMBL;Acc:Q8RX60]
SUBAcon: [extracellular,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.