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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 5
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 5
  • vacuole 7
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d037411_P001 Maize plastid 69.08 78.83
HORVU7Hr1G045670.1 Barley vacuole 64.82 66.09
TraesCS7D01G224300.1 Wheat vacuole 65.46 65.88
TraesCS7B01G129200.1 Wheat vacuole 65.25 65.52
EES03312 Sorghum extracellular 61.19 61.32
OQU76307 Sorghum endoplasmic reticulum, extracellular, vacuole 60.55 60.55
EER88307 Sorghum endoplasmic reticulum, extracellular, vacuole 59.49 60.0
Os06t0306500-00 Rice plasma membrane, vacuole 47.76 56.57
KXG19878 Sorghum vacuole 52.88 54.39
GSMUA_Achr3P04040_001 Banana mitochondrion 39.45 49.33
EES07336 Sorghum vacuole 48.4 48.71
EES07353 Sorghum extracellular, vacuole 48.61 48.1
EER89658 Sorghum vacuole 47.55 48.06
EES07335 Sorghum vacuole 46.91 47.83
EES05617 Sorghum endoplasmic reticulum, vacuole 47.12 47.42
EES06163 Sorghum vacuole 48.83 46.45
GSMUA_Achr3P04020_001 Banana vacuole 39.02 46.21
GSMUA_Achr3P04060_001 Banana vacuole 39.02 45.98
EER96951 Sorghum endoplasmic reticulum 40.51 38.93
KRH46246 Soybean cytosol 25.59 38.59
CDX97055 Canola cytosol, plastid, vacuole 34.12 38.19
EER96952 Sorghum mitochondrion 39.02 38.05
CDX69804 Canola vacuole 38.59 38.03
VIT_04s0008g07080.t01 Wine grape extracellular 34.97 37.96
CDX85746 Canola vacuole 38.38 37.74
OQU84087 Sorghum endoplasmic reticulum, vacuole 40.94 37.72
Bra028568.1-P Field mustard vacuole 38.17 37.53
CDY40117 Canola extracellular, vacuole 38.17 37.53
AT5G10760.1 Thale cress vacuole 36.67 37.07
EER89096 Sorghum plasma membrane, vacuole 38.38 37.04
EER88640 Sorghum extracellular, plasma membrane, vacuole 39.66 36.98
CDX97058 Canola cytosol, extracellular, nucleus 38.59 36.86
VIT_04s0008g07110.t01 Wine grape extracellular 37.74 36.8
OQU76292 Sorghum plasma membrane, plastid, vacuole 38.17 36.76
AT5G10770.1 Thale cress vacuole 37.1 36.71
CDY70207 Canola plastid, vacuole 36.89 36.65
CDX97054 Canola extracellular, plastid, vacuole 36.89 36.58
KRH46242 Soybean vacuole 37.53 36.29
KRH46241 Soybean nucleus, vacuole 37.74 36.27
KRG98688 Soybean nucleus 37.74 36.12
PGSC0003DMT400059566 Potato extracellular 37.31 36.08
Solyc08g067100.2.1 Tomato extracellular, plastid 37.74 35.33
KRH46245 Soybean nucleus 36.03 35.06
Bra009007.1-P Field mustard plastid, vacuole 31.98 34.48
OQU82570 Sorghum endoplasmic reticulum, vacuole 34.12 34.33
CDY72573 Canola plastid, vacuole 31.77 34.25
KRH73277 Soybean extracellular 33.26 33.84
KRH73276 Soybean cytosol 29.42 33.74
EES02514 Sorghum endoplasmic reticulum, vacuole 36.03 33.2
EER89099 Sorghum plastid 36.89 33.14
OQU76291 Sorghum vacuole 33.05 32.98
EES07349 Sorghum vacuole 32.2 32.97
CDY40116 Canola extracellular 33.48 32.78
CDX85747 Canola extracellular, vacuole 32.62 32.01
Bra028569.1-P Field mustard extracellular 32.41 31.8
EES16428 Sorghum extracellular 33.05 31.38
OQU92922 Sorghum vacuole 32.62 31.22
KXG22664 Sorghum extracellular, plastid, vacuole 33.26 31.14
KXG24090 Sorghum extracellular 32.62 30.91
KRH73176 Soybean extracellular, vacuole 30.28 30.74
KXG24092 Sorghum vacuole 31.56 30.08
OQU79707 Sorghum vacuole 32.2 30.02
EES01017 Sorghum mitochondrion, plastid 33.05 29.92
KXG19867 Sorghum golgi 35.82 29.89
KXG33265 Sorghum vacuole 28.57 29.45
EER96754 Sorghum endoplasmic reticulum, extracellular, plasma membrane 31.98 29.3
EER97501 Sorghum vacuole 31.34 28.43
EER97174 Sorghum vacuole 31.77 28.38
EES14825 Sorghum plastid 32.84 28.36
CDX69805 Canola cytosol 31.56 25.96
Bra009006.1-P Field mustard plasma membrane, plastid, vacuole 38.81 17.77
GSMUA_Achr3P04070_001 Banana nucleus 40.3 15.44
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10InterPro:Aspartic_peptidase_A1InterPro:Aspartic_peptidase_ASUniProt:C5Z1J8EnsemblPlants:EER88303
ProteinID:EER88303ProteinID:EER88303.1GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0009056GO:GO:0016787GO:GO:0019538
GO:GO:0030163InterPro:IPR021109InterPro:IPR033121InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543
ScanProsite:PS00141PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF367InterPro:Peptidase_aspartic_dom_sfEnsemblPlantsGene:SORBI_3010G128800
SUPFAM:SSF50630SignalP:SignalP-noTMInterPro:TAXi_CInterPro:TAXi_NUniParc:UPI0001A88F25RefSeq:XP_002436936.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr10:+:17172501..17174220
Molecular Weight (calculated)
48434.1 Da
IEP (calculated)
4.310
GRAVY (calculated)
0.143
Length
469 amino acids
Sequence
(BLAST)
001: MASSPLLLCA LLLCSYCLIA LGGNEHGFVV VQTSTSSPSN AACSPAAQVT SDPSRASMPL MYRHGPCAPA SAAATNRPSP AEMLRRDRAR RNHILRKASG
101: RRITLGVSIP TSLGAFVDSL QYVVTLGFGT PAVPQVLLID TGSDLSWVQC QPCNSSTCYP QKDPVFDPSA SSTYAPVPCG SEACRDLDPD SYANGCTNSS
201: SGASLCQYGI QYGNGDTTVG VYSTETLTLS PEAATVVNNF SFGCGLVQKG VFDLFDGLLG LGGAPESLVS QTTGTYGGAF SYCLPAGNST AGFLALGAPA
301: TGGNNTAGFQ FTPLQVVETT FYLVKLTGIS VGGKQLDIEP TVFAGGMIID SGTIVTGLPE TAYSALRTAF RSAMSAYPLL PPNDDEDLDT CYDFTGNTNV
401: TVPTVALTFE GGVTIDLDVP SGVLLDGCLA FVAGASDGDT GIIGNVNQRT FEVLYDSARG HVGFRAGAC
Best Arabidopsis Sequence Match ( AT1G01300.1 )
(BLAST)
001: MVGRRKALLF SLCFFFLSLP SFSSLPSFQT LFPNSHSLPC ASPVSFQPDS DSESLLESEF ESGSDSESSS SITLNLDHID ALSSNKTPDE LFSSRLQRDS
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA
Arabidopsis Description
APF2Aspartyl protease family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ3]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.