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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d051693_P001 Maize endoplasmic reticulum, vacuole 83.69 85.15
TraesCS7A01G489100.1 Wheat cytosol, mitochondrion 65.45 80.69
TraesCS7B01G392500.1 Wheat plastid 54.72 80.19
TraesCS7A01G489200.1 Wheat vacuole 77.25 78.26
TraesCS7D01G475500.1 Wheat endoplasmic reticulum 75.97 77.12
EES07335 Sorghum vacuole 75.54 76.52
EES07336 Sorghum vacuole 76.18 76.18
TraesCS7A01G489400.1 Wheat endoplasmic reticulum 75.11 76.09
TraesCS7A01G489300.1 Wheat endoplasmic reticulum 74.89 75.54
TraesCS7B01G392400.1 Wheat endoplasmic reticulum, extracellular, vacuole 74.46 75.43
TraesCS7B01G392300.1 Wheat extracellular 50.64 74.21
TraesCS7A01G489000.1 Wheat endoplasmic reticulum, extracellular 72.32 73.9
TraesCSU01G254900.2 Wheat endoplasmic reticulum 59.66 73.35
TraesCS7D01G475300.1 Wheat extracellular, vacuole 71.67 73.25
TraesCS7D01G475600.1 Wheat endoplasmic reticulum, extracellular, vacuole 76.18 70.58
HORVU7Hr1G109730.1 Barley plasma membrane 74.03 68.73
HORVU7Hr1G109750.4 Barley plastid 70.82 68.32
EES06163 Sorghum vacuole 70.82 66.94
EER89658 Sorghum vacuole 57.08 57.33
GSMUA_Achr3P04040_001 Banana mitochondrion 37.98 47.2
EER88303 Sorghum vacuole 47.42 47.12
EES07353 Sorghum extracellular, vacuole 47.64 46.84
GSMUA_Achr3P04020_001 Banana vacuole 39.48 46.46
EER88307 Sorghum endoplasmic reticulum, extracellular, vacuole 46.35 46.45
EES03312 Sorghum extracellular 46.14 45.94
OQU76307 Sorghum endoplasmic reticulum, extracellular, vacuole 45.71 45.42
KXG19878 Sorghum vacuole 43.56 44.52
GSMUA_Achr3P04060_001 Banana vacuole 37.98 44.47
EER89096 Sorghum plasma membrane, vacuole 45.06 43.21
OQU84087 Sorghum endoplasmic reticulum, vacuole 44.85 41.06
VIT_04s0008g07080.t01 Wine grape extracellular 37.55 40.51
EER96951 Sorghum endoplasmic reticulum 41.63 39.75
CDY40117 Canola extracellular, vacuole 40.56 39.62
VIT_04s0008g07110.t01 Wine grape extracellular 40.77 39.5
AT5G10770.1 Thale cress vacuole 40.13 39.45
EER96952 Sorghum mitochondrion 40.34 39.09
Bra028568.1-P Field mustard vacuole 39.91 38.99
CDX85746 Canola vacuole 39.91 38.99
EER88640 Sorghum extracellular, plasma membrane, vacuole 41.42 38.37
KRG98688 Soybean nucleus 40.34 38.37
EER89099 Sorghum plastid 42.92 38.31
PGSC0003DMT400059566 Potato extracellular 39.7 38.14
CDX69804 Canola vacuole 38.2 37.4
KRH46245 Soybean nucleus 38.41 37.14
KRH46241 Soybean nucleus, vacuole 38.84 37.09
CDX97055 Canola cytosol, plastid, vacuole 33.26 36.99
KRH46246 Soybean cytosol 24.68 36.98
Solyc08g067100.2.1 Tomato extracellular, plastid 39.7 36.93
KRH46242 Soybean vacuole 38.41 36.91
OQU76291 Sorghum vacuole 36.91 36.6
CDX97058 Canola cytosol, extracellular, nucleus 38.41 36.46
EES07349 Sorghum vacuole 35.62 36.24
CDY70207 Canola plastid, vacuole 36.7 36.23
CDX97054 Canola extracellular, plastid, vacuole 36.7 36.15
AT5G10760.1 Thale cress vacuole 35.62 35.78
OQU76292 Sorghum plasma membrane, plastid, vacuole 37.12 35.52
KRH73276 Soybean cytosol 30.26 34.47
CDY40116 Canola extracellular 35.41 34.45
Bra028569.1-P Field mustard extracellular 34.98 34.1
CDX85747 Canola extracellular, vacuole 34.98 34.1
EER96754 Sorghum endoplasmic reticulum, extracellular, plasma membrane 36.48 33.2
KRH73277 Soybean extracellular 32.83 33.19
OQU82570 Sorghum endoplasmic reticulum, vacuole 33.05 33.05
Bra009007.1-P Field mustard plastid, vacuole 30.69 32.87
CDY72573 Canola plastid, vacuole 30.47 32.64
KRH73176 Soybean extracellular, vacuole 31.76 32.03
EES02514 Sorghum endoplasmic reticulum, vacuole 33.69 30.84
KXG19867 Sorghum golgi 36.91 30.61
EES14825 Sorghum plastid 34.76 29.83
KXG24092 Sorghum vacuole 30.9 29.27
EES01017 Sorghum mitochondrion, plastid 31.12 27.99
KXG24090 Sorghum extracellular 29.61 27.88
KXG33265 Sorghum vacuole 27.04 27.69
KXG22664 Sorghum extracellular, plastid, vacuole 29.18 27.15
EES16428 Sorghum extracellular 28.76 27.13
OQU92922 Sorghum vacuole 28.33 26.94
OQU79707 Sorghum vacuole 28.54 26.44
CDX69805 Canola cytosol 31.97 26.14
EER97174 Sorghum vacuole 28.76 25.52
EER97501 Sorghum vacuole 28.11 25.34
Bra009006.1-P Field mustard plasma membrane, plastid, vacuole 37.98 17.29
GSMUA_Achr3P04070_001 Banana nucleus 42.7 16.26
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10EntrezGene:8071770InterPro:Aspartic_peptidase_A1UniProt:C5XZU2InterPro:CND41-like
EnsemblPlants:EES05617ProteinID:EES05617ProteinID:EES05617.1GO:GO:0003674GO:GO:0003824GO:GO:0004190
GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0009056GO:GO:0016787
GO:GO:0019538GO:GO:0030163InterPro:IPR021109InterPro:IPR033121InterPro:PEPTIDASE_A1PFAM:PF14541
PFAM:PF14543PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF290InterPro:Peptidase_aspartic_dom_sfEnsemblPlantsGene:SORBI_3004G258300
SUPFAM:SSF50630unigene:Sbi.11581SignalP:SignalP-noTMInterPro:TAXi_CInterPro:TAXi_NTMHMM:TMhelix
UniParc:UPI0001A85D0DRefSeq:XP_002452641.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr4:+:60399282..60400975
Molecular Weight (calculated)
48455.2 Da
IEP (calculated)
6.678
GRAVY (calculated)
0.021
Length
466 amino acids
Sequence
(BLAST)
001: MKQHTMTSIS KFLLLLLCSY LCLVAHAADH RTHKVLSVGS LKSAATCSEP KATPPSTSGG ITVPLHHRHG PCSPVPSNKM PASLEERLQR DQLRAAYIKR
101: KFSGAKGGDV EQSDAATVPT TLGTSLSTLE YVITVGIGSP AVTQTMSMDT GSDVSWVQCK PCSQCHSEVD SLFDPSASST YSPFSCSSAA CVQLSQSQQG
201: NGCSSSQCQY IVSYVDGSST TGTYSSDTLT LGSNAIKGFQ FGCSQSESGG FSDQTDGLMG LGGDAQSLVS QTAGTFGKAF SYCLPPTPGS SGFLTLGAAS
301: RSGFVKTPML RSTQIPTYYG VLLEAIRVGG QQLNIPTSVF SAGSVMDSGT VITRLPPTAY SALSSAFKAG MKKYPPAQPS GILDTCFDFS GQSSVSIPSV
401: ALVFSGGAVV NLDFNGIMLE LDNWCLAFAA NSDDSSLGFI GNVQQRTFEV LYDVGGGAVG FRAGAC
Best Arabidopsis Sequence Match ( AT5G10770.1 )
(BLAST)
001: MSINRNLLNI IIILCICLNL GCNDGAQERE TDSHTIQVSS LLPSSSSSCV LSPRASTTKS SLHVTHRHGT CSRLNNGKAT SPDHVEILRL DQARVNSIHS
101: KLSKKLATDH VSESKSTDLP AKDGSTLGSG NYIVTVGLGT PKNDLSLIFD TGSDLTWTQC QPCVRTCYDQ KEPIFNPSKS TSYYNVSCSS AACGSLSSAT
201: GNAGSCSASN CIYGIQYGDQ SFSVGFLAKE KFTLTNSDVF DGVYFGCGEN NQGLFTGVAG LLGLGRDKLS FPSQTATAYN KIFSYCLPSS ASYTGHLTFG
301: SAGISRSVKF TPISTITDGT SFYGLNIVAI TVGGQKLPIP STVFSTPGAL IDSGTVITRL PPKAYAALRS SFKAKMSKYP TTSGVSILDT CFDLSGFKTV
401: TIPKVAFSFS GGAVVELGSK GIFYVFKISQ VCLAFAGNSD DSNAAIFGNV QQQTLEVVYD GAGGRVGFAP NGCS
Arabidopsis Description
Aspartyl protease family protein At5g10770 [Source:UniProtKB/Swiss-Prot;Acc:Q8S9J6]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.