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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid, vacuole

Predictor Summary:
  • plastid 3
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 5
  • golgi 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, plastid, vacuole
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d045831_P001 Maize plastid 76.59 77.39
GSMUA_Achr3P04040_001 Banana mitochondrion 32.85 42.67
AT5G10760.1 Thale cress vacuole 39.01 40.95
GSMUA_Achr3P04020_001 Banana vacuole 32.65 40.15
AT5G10770.1 Thale cress vacuole 39.01 40.08
CDX69804 Canola vacuole 39.01 39.92
CDX85746 Canola vacuole 39.01 39.83
CDY40117 Canola extracellular, vacuole 38.81 39.62
Bra028568.1-P Field mustard vacuole 38.81 39.62
GSMUA_Achr3P04060_001 Banana vacuole 32.03 39.2
CDX97055 Canola cytosol, plastid, vacuole 33.68 39.14
CDX97058 Canola cytosol, extracellular, nucleus 39.01 38.7
CDX97054 Canola extracellular, plastid, vacuole 37.58 38.69
EES03312 Sorghum extracellular 37.17 38.68
EER96952 Sorghum mitochondrion 37.99 38.46
CDY70207 Canola plastid, vacuole 37.17 38.35
VIT_04s0008g07110.t01 Wine grape extracellular 37.78 38.25
VIT_04s0008g07080.t01 Wine grape extracellular 33.88 38.19
EER88303 Sorghum vacuole 36.76 38.17
EER89658 Sorghum vacuole 36.14 37.93
EER96951 Sorghum endoplasmic reticulum 37.99 37.91
EER88307 Sorghum endoplasmic reticulum, extracellular, vacuole 35.73 37.42
KRH46245 Soybean nucleus 36.96 37.34
EES07353 Sorghum extracellular, vacuole 36.34 37.34
KRH46246 Soybean cytosol 23.82 37.3
Bra009007.1-P Field mustard plastid, vacuole 33.26 37.24
EES05617 Sorghum endoplasmic reticulum, vacuole 35.52 37.12
CDY72573 Canola plastid, vacuole 33.06 37.01
EES07335 Sorghum vacuole 34.7 36.74
EES07336 Sorghum vacuole 34.91 36.48
KXG19878 Sorghum vacuole 34.09 36.4
PGSC0003DMT400059566 Potato extracellular 35.93 36.08
OQU76307 Sorghum endoplasmic reticulum, extracellular, vacuole 34.5 35.82
EER88640 Sorghum extracellular, plasma membrane, vacuole 36.96 35.79
EES06163 Sorghum vacuole 35.93 35.5
KRG98688 Soybean nucleus 35.32 35.1
KRH46242 Soybean vacuole 34.91 35.05
KRH46241 Soybean nucleus, vacuole 35.11 35.04
CDY40116 Canola extracellular 33.88 34.45
Solyc08g067100.2.1 Tomato extracellular, plastid 35.32 34.33
OQU82570 Sorghum endoplasmic reticulum, vacuole 32.65 34.12
CDX85747 Canola extracellular, vacuole 33.26 33.89
Bra028569.1-P Field mustard extracellular 33.26 33.89
EES07349 Sorghum vacuole 31.01 32.97
OQU76291 Sorghum vacuole 31.62 32.77
EES02514 Sorghum endoplasmic reticulum, vacuole 33.68 32.22
KRH73276 Soybean cytosol 26.69 31.78
KRH73277 Soybean extracellular 29.98 31.67
KXG33265 Sorghum vacuole 29.57 31.65
EES01017 Sorghum mitochondrion, plastid 33.06 31.08
EER96754 Sorghum endoplasmic reticulum, extracellular, plasma membrane 32.65 31.05
EES16428 Sorghum extracellular 31.21 30.77
KXG22664 Sorghum extracellular, plastid, vacuole 31.62 30.74
EER89096 Sorghum plasma membrane, vacuole 30.6 30.66
KXG24092 Sorghum vacuole 30.6 30.28
KXG24090 Sorghum extracellular 30.39 29.9
KRH73176 Soybean extracellular, vacuole 28.34 29.87
OQU84087 Sorghum endoplasmic reticulum, vacuole 31.01 29.67
EES14825 Sorghum plastid 33.06 29.65
OQU79707 Sorghum vacuole 30.6 29.62
EER97174 Sorghum vacuole 31.83 29.52
EER97501 Sorghum vacuole 31.21 29.4
OQU92922 Sorghum vacuole 29.57 29.39
KXG19867 Sorghum golgi 33.26 28.83
CDX69805 Canola cytosol 33.06 28.25
EER89099 Sorghum plastid 26.69 24.9
Bra009006.1-P Field mustard plasma membrane, plastid, vacuole 39.01 18.55
GSMUA_Achr3P04070_001 Banana nucleus 38.81 15.44
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10EntrezGene:8076439UniProt:A0A1W0VSN9InterPro:Aspartic_peptidase_A1InterPro:Aspartic_peptidase_AS
GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0006508GO:GO:0008150GO:GO:0008152
GO:GO:0008233GO:GO:0016787GO:GO:0019538InterPro:IPR021109InterPro:IPR033121EnsemblPlants:OQU76292
ProteinID:OQU76292ProteinID:OQU76292.1InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543PRINTS:PR00792
ScanProsite:PS00141PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF393InterPro:Peptidase_aspartic_dom_sfEnsemblPlantsGene:SORBI_3010G126400
SUPFAM:SSF50630SignalP:SignalP-noTMInterPro:TAXi_CInterPro:TAXi_NUniParc:UPI0001A89B18RefSeq:XP_002438284.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr10:-:15823053..15825094
Molecular Weight (calculated)
51378.9 Da
IEP (calculated)
5.904
GRAVY (calculated)
0.063
Length
487 amino acids
Sequence
(BLAST)
001: MAADWTLRHL ALILLSITSQ QVLAARQQDR HTISVQSLLS SSMCSSPSST APAGSTLQIV HRACLQTGDD IAVPDHHHYT GILRRDRHRV RSIYRRLTAA
101: ETTTTTTTIP ARLGLAFQSL EYVVTIGIGT PPRNFTVLFD TGSDLTWVQC LPCPDSSCYP QQEPLFDPSK SSTYVDVPCS APECHIGGVQ QTRCGATSCE
201: YSVKYGDESE THGSLAEETF TLSPPSPLAP AATGVVFGCS HEYISVFNDT GMGVAGLLGL GRGDSSILSQ TRRSINSGGG VFSYCLPPRG SSTGYLTIGG
301: GAAAPQQQYS NLSFTPLITT ISQLRSAYVV NLAGVSVNGA AVDIPASAFS LGAVIDSGTV VTHMPAAAYY PLRDEFRLHM GSYKMLPEGS MKLLDTCYDV
401: TGQDVVTAPR VALEFGGGAR IDVDASGILL VLPAEDGSGQ SLTLACLAFL PTNSAGLVIV GNMQQRAYNV VFDVDGGRIG FGPNGCS
Best Arabidopsis Sequence Match ( AT5G10760.1 )
(BLAST)
001: MSIMRNFLSM IIMLCVCLNW CFAEGAEKSD SGKVLDSYTI QVSSLFPSSS SCVPSSKASN TKSSLRVVHM HGACSHLSSD ARVDHDEIIR RDQARVESIY
101: SKLSKNSANE VSEAKSTELP AKSGITLGSG NYIVTIGIGT PKHDLSLVFD TGSDLTWTQC EPCLGSCYSQ KEPKFNPSSS STYQNVSCSS PMCEDAESCS
201: ASNCVYSIVY GDKSFTQGFL AKEKFTLTNS DVLEDVYFGC GENNQGLFDG VAGLLGLGPG KLSLPAQTTT TYNNIFSYCL PSFTSNSTGH LTFGSAGISE
301: SVKFTPISSF PSAFNYGIDI IGISVGDKEL AITPNSFSTE GAIIDSGTVF TRLPTKVYAE LRSVFKEKMS SYKSTSGYGL FDTCYDFTGL DTVTYPTIAF
401: SFAGSTVVEL DGSGISLPIK ISQVCLAFAG NDDLPAIFGN VQQTTLDVVY DVAGGRVGFA PNGC
Arabidopsis Description
AED1Aspartyl protease AED1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LEW3]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.