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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 6
  • plasma membrane 6
  • golgi 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d020886_P001 Maize endoplasmic reticulum, vacuole 77.25 79.04
TraesCS5A01G259400.2 Wheat mitochondrion 57.58 58.42
TraesCS5D01G267300.1 Wheat mitochondrion 57.79 58.26
Os09t0482200-01 Rice plasma membrane, vacuole 57.79 58.14
Os09t0482500-01 Rice extracellular 57.79 58.14
TraesCS5B01G258200.1 Wheat plastid, vacuole 56.15 56.85
EER96952 Sorghum mitochondrion 55.94 56.76
HORVU5Hr1G072370.1 Barley mitochondrion, vacuole 56.15 56.61
GSMUA_Achr3P04040_001 Banana mitochondrion 34.63 45.07
EER89658 Sorghum vacuole 40.78 42.89
GSMUA_Achr3P04020_001 Banana vacuole 34.63 42.68
EES07353 Sorghum extracellular, vacuole 41.39 42.62
VIT_04s0008g07080.t01 Wine grape extracellular 37.5 42.36
GSMUA_Achr3P04060_001 Banana vacuole 34.22 41.96
EES05617 Sorghum endoplasmic reticulum, vacuole 39.75 41.63
EER88640 Sorghum extracellular, plasma membrane, vacuole 42.42 41.15
EES07335 Sorghum vacuole 38.73 41.09
CDX97055 Canola cytosol, plastid, vacuole 35.25 41.05
EES07336 Sorghum vacuole 39.14 40.99
VIT_04s0008g07110.t01 Wine grape extracellular 40.37 40.96
KRG98688 Soybean nucleus 40.78 40.61
EER88303 Sorghum vacuole 38.93 40.51
CDY70207 Canola plastid, vacuole 39.14 40.47
CDX69804 Canola vacuole 39.14 40.13
AT5G10770.1 Thale cress vacuole 38.93 40.08
EER88307 Sorghum endoplasmic reticulum, extracellular, vacuole 37.91 39.78
KRH46241 Soybean nucleus, vacuole 39.34 39.34
OQU76307 Sorghum endoplasmic reticulum, extracellular, vacuole 37.7 39.23
AT5G10760.1 Thale cress vacuole 37.3 39.22
KXG19878 Sorghum vacuole 36.48 39.04
CDX97054 Canola extracellular, plastid, vacuole 37.7 38.9
CDX97058 Canola cytosol, extracellular, nucleus 39.14 38.9
EES03312 Sorghum extracellular 37.3 38.89
KRH46245 Soybean nucleus 38.11 38.59
CDX85746 Canola vacuole 37.7 38.57
CDY40117 Canola extracellular, vacuole 37.7 38.57
Bra028568.1-P Field mustard vacuole 37.7 38.57
KRH46242 Soybean vacuole 38.32 38.56
OQU76292 Sorghum plasma membrane, plastid, vacuole 37.91 37.99
KRH73277 Soybean extracellular 35.66 37.74
Bra009007.1-P Field mustard plastid, vacuole 33.61 37.7
EES06163 Sorghum vacuole 37.91 37.53
CDY72573 Canola plastid, vacuole 33.4 37.47
PGSC0003DMT400059566 Potato extracellular 37.09 37.32
KRH46246 Soybean cytosol 23.36 36.66
EES07349 Sorghum vacuole 34.22 36.46
KRH73276 Soybean cytosol 30.53 36.43
OQU76291 Sorghum vacuole 34.84 36.17
Solyc08g067100.2.1 Tomato extracellular, plastid 36.89 35.93
EER89096 Sorghum plasma membrane, vacuole 35.04 35.19
KRH73176 Soybean extracellular, vacuole 32.17 33.98
Bra028569.1-P Field mustard extracellular 32.79 33.47
CDY40116 Canola extracellular 32.79 33.4
CDX85747 Canola extracellular, vacuole 32.58 33.26
OQU82570 Sorghum endoplasmic reticulum, vacuole 31.76 33.26
OQU84087 Sorghum endoplasmic reticulum, vacuole 34.63 33.2
KXG19867 Sorghum golgi 38.11 33.1
EES02514 Sorghum endoplasmic reticulum, vacuole 33.61 32.22
EES01017 Sorghum mitochondrion, plastid 34.02 32.05
KXG22664 Sorghum extracellular, plastid, vacuole 32.79 31.94
EER96754 Sorghum endoplasmic reticulum, extracellular, plasma membrane 33.4 31.84
KXG24092 Sorghum vacuole 31.56 31.3
KXG33265 Sorghum vacuole 28.48 30.55
EES16428 Sorghum extracellular 30.53 30.16
KXG24090 Sorghum extracellular 30.53 30.1
EER97174 Sorghum vacuole 32.38 30.1
OQU79707 Sorghum vacuole 30.94 30.02
CDX69805 Canola cytosol 35.04 30.0
EER97501 Sorghum vacuole 31.76 29.98
EES14825 Sorghum plastid 33.2 29.83
OQU92922 Sorghum vacuole 29.51 29.39
EER89099 Sorghum plastid 30.94 28.93
Bra009006.1-P Field mustard plasma membrane, plastid, vacuole 39.34 18.75
GSMUA_Achr3P04070_001 Banana nucleus 40.57 16.18
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10EntrezGene:8063767InterPro:Aspartic_peptidase_A1UniProt:C5X3T3EnsemblPlants:EER96951
ProteinID:EER96951ProteinID:EER96951.1GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0009056GO:GO:0016787GO:GO:0019538
GO:GO:0030163InterPro:IPR021109InterPro:IPR033121InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543
PRINTS:PR00792PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF393InterPro:Peptidase_aspartic_dom_sfEnsemblPlantsGene:SORBI_3002G242900
SUPFAM:SSF50630SignalP:SignalP-noTMInterPro:TAXi_CInterPro:TAXi_NTMHMM:TMhelixUniParc:UPI0001A8372D
RefSeq:XP_002460430.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr2:+:63195009..63197395
Molecular Weight (calculated)
50871.6 Da
IEP (calculated)
7.415
GRAVY (calculated)
-0.061
Length
488 amino acids
Sequence
(BLAST)
001: MEHSAIFSGC CLAAALLVLV VALAAPHRLG AAAAAAAPGD GSETNWHVVS VNSLLPNTVC TSTKGPAAAP SSLTVVHRHG PCSPLRSRGS GAPSHTEILR
101: RDQDRVDAIR RKVTASSNKP KGGVSLLANW GKSLSTTNYV ASLRLGTPAT ELVVELDTGS DQSWVQCKPC ADCYEQRDPV FDPTASSTYS AVPCGARECQ
201: ELASSSSSRN CSSDNNKNCP YEVSYDDDSH TVGDLARDTL TLSPSPSPSP ADTVPGFVFG CGHSNAGTFG EVDGLLGLGL GKASLPSQVA ARYGAAFSYC
301: LPSSPSAAGY LSFGGAAARA NAQFTEMVTG QDPTSYYLNL TGIVVAGRAI KVPASAFATA AGTIIDSGTA FSRLPPSAYA ALRSSFRSAM GRYRYKRAPS
401: SPIFDTCYDF TGHETVRIPA VELVFADGAT VHLHPSGVLY TWNDVAQTCL AFVPNHDLGI LGNTQQRTLA VIYDVGSQRI GFGRKGCA
Best Arabidopsis Sequence Match ( AT5G10770.1 )
(BLAST)
001: MSINRNLLNI IIILCICLNL GCNDGAQERE TDSHTIQVSS LLPSSSSSCV LSPRASTTKS SLHVTHRHGT CSRLNNGKAT SPDHVEILRL DQARVNSIHS
101: KLSKKLATDH VSESKSTDLP AKDGSTLGSG NYIVTVGLGT PKNDLSLIFD TGSDLTWTQC QPCVRTCYDQ KEPIFNPSKS TSYYNVSCSS AACGSLSSAT
201: GNAGSCSASN CIYGIQYGDQ SFSVGFLAKE KFTLTNSDVF DGVYFGCGEN NQGLFTGVAG LLGLGRDKLS FPSQTATAYN KIFSYCLPSS ASYTGHLTFG
301: SAGISRSVKF TPISTITDGT SFYGLNIVAI TVGGQKLPIP STVFSTPGAL IDSGTVITRL PPKAYAALRS SFKAKMSKYP TTSGVSILDT CFDLSGFKTV
401: TIPKVAFSFS GGAVVELGSK GIFYVFKISQ VCLAFAGNSD DSNAAIFGNV QQQTLEVVYD GAGGRVGFAP NGCS
Arabidopsis Description
Aspartyl protease family protein At5g10770 [Source:UniProtKB/Swiss-Prot;Acc:Q8S9J6]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.