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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
EES06387

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G01300.1 EES06387 AT4G31920.1 18642946
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d043617_P001 Maize endoplasmic reticulum, extracellular, vacuole 87.69 88.27
TraesCS3A01G287800.1 Wheat cytosol 54.51 69.47
Os01t0720000-00 Rice vacuole 65.71 67.04
HORVU3Hr1G068330.1 Barley plastid, vacuole 63.96 65.99
TraesCS3D01G287600.1 Wheat vacuole 62.2 63.31
TraesCS3B01G322500.1 Wheat vacuole 61.1 62.75
KXG22664 Sorghum extracellular, plastid, vacuole 45.71 41.52
Solyc10g009410.1.1 Tomato extracellular 41.32 41.05
PGSC0003DMT400048585 Potato vacuole 41.54 41.0
EES01017 Sorghum mitochondrion, plastid 46.37 40.73
KRH68920 Soybean nucleus 40.88 40.35
KRG97194 Soybean endoplasmic reticulum 41.76 40.25
Solyc01g096040.2.1 Tomato nucleus, plastid 42.2 39.92
KRH06457 Soybean endoplasmic reticulum, vacuole 41.76 39.92
KRH47900 Soybean nucleus 41.32 39.75
PGSC0003DMT400000651 Potato vacuole 41.76 39.58
VIT_15s0046g00360.t01 Wine grape extracellular 41.32 38.45
CDY15187 Canola vacuole 40.44 38.25
CDX90023 Canola vacuole 40.44 38.25
Bra033271.1-P Field mustard vacuole 40.44 38.25
AT1G01300.1 Thale cress vacuole 40.44 37.94
Bra014420.1-P Field mustard vacuole 39.34 37.06
OQU82570 Sorghum endoplasmic reticulum, vacuole 37.58 36.7
AT3G61820.1 Thale cress extracellular, vacuole 38.9 36.65
CDY43952 Canola vacuole 38.9 36.65
EES16428 Sorghum extracellular 39.78 36.64
OQU92922 Sorghum vacuole 39.34 36.53
CDX67868 Canola vacuole 38.9 36.49
CDX89133 Canola vacuole 38.68 36.44
KXG24092 Sorghum vacuole 39.34 36.38
KXG24090 Sorghum extracellular 39.34 36.16
Bra003476.1-P Field mustard vacuole 38.46 36.08
CDY25081 Canola vacuole 38.02 35.67
EES02514 Sorghum endoplasmic reticulum, vacuole 39.34 35.17
OQU79707 Sorghum vacuole 38.68 34.99
GSMUA_Achr3P31640_001 Banana cytosol 41.76 33.81
EER96952 Sorghum mitochondrion 33.63 31.81
EER97501 Sorghum vacuole 34.51 30.37
EES07353 Sorghum extracellular, vacuole 31.43 30.17
KXG19878 Sorghum vacuole 30.11 30.04
OQU76291 Sorghum vacuole 30.99 30.0
EES03312 Sorghum extracellular 30.77 29.91
EER97174 Sorghum vacuole 34.51 29.9
OQU76292 Sorghum plasma membrane, plastid, vacuole 31.65 29.57
EES07349 Sorghum vacuole 29.67 29.48
EER88307 Sorghum endoplasmic reticulum, extracellular, vacuole 30.11 29.46
EES07335 Sorghum vacuole 29.23 28.91
OQU76307 Sorghum endoplasmic reticulum, extracellular, vacuole 29.67 28.78
EER88303 Sorghum vacuole 29.45 28.57
EER96951 Sorghum endoplasmic reticulum 30.55 28.48
EER88640 Sorghum extracellular, plasma membrane, vacuole 31.43 28.43
EER89658 Sorghum vacuole 28.79 28.23
EES07336 Sorghum vacuole 28.79 28.11
EES05617 Sorghum endoplasmic reticulum, vacuole 27.69 27.04
EES06163 Sorghum vacuole 29.01 26.77
EER96754 Sorghum endoplasmic reticulum, extracellular, plasma membrane 28.79 25.59
EER89096 Sorghum plasma membrane, vacuole 26.37 24.69
EES14825 Sorghum plastid 28.79 24.13
OQU84087 Sorghum endoplasmic reticulum, vacuole 26.37 23.58
KXG19867 Sorghum golgi 27.03 21.89
EER89099 Sorghum plastid 25.05 21.84
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10UniProt:A0A1B6Q5S7InterPro:Aspartic_peptidase_A1InterPro:Aspartic_peptidase_ASGO:GO:0003674
GO:GO:0003824GO:GO:0004190GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233
GO:GO:0016787GO:GO:0019538InterPro:IPR021109InterPro:IPR033121EnsemblPlants:KXG33265ProteinID:KXG33265
ProteinID:KXG33265.1InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543PRINTS:PR00792ScanProsite:PS00141
PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF338InterPro:Peptidase_aspartic_dom_sfEnsemblPlantsGene:SORBI_3003G279000SUPFAM:SSF50630
SignalP:SignalP-noTMInterPro:TAXi_CInterPro:TAXi_NUniParc:UPI00081ABA16SEG:seg:
Description
hypothetical protein
Coordinates
chr3:-:61489537..61490904
Molecular Weight (calculated)
48508.7 Da
IEP (calculated)
8.368
GRAVY (calculated)
-0.017
Length
455 amino acids
Sequence
(BLAST)
001: MASPDALPLR FLLVVLVTFT ADATHRPKTL HIPVVHRGAV FPSRRGAPPG SLRRCRHAAP FTAQVASFHS IAADDDDRLR SPVMSGVPFD SGEYFAVINV
101: GDPPTRALVV IDTGSDLIWL QCVPCRHCYR QVTPLYDPRS SSTHRRIPCA SPRCRDVLRY PGCDARTGGC VYMVVYGDGS ASSGDLATDR LVFPDDTHVH
201: NVTLGCGHDN VGLLESAAGL LGVGRGQLSF PTQLAPAYGH VFSYCLGDRL SRAQNGSSYL VFGRTPEPPS TAFTPLRTNP RRPSLYYVDM VGFSVGGERV
301: TGFSNASLAL NPATGRGGIV VDSGTAISRF ARDAYAAVRD AFDSHAAAAG TMRKLATKFS VFDACYDLRG NGAPAAAVRV PSIVLHFAGG ADMALPQANY
401: LIPVQGGDRR TYFCLGLQAA DDGLNVLGNV QQQGFGLVFD VERGRIGFTP NGCSV
Best Arabidopsis Sequence Match ( AT3G20015.1 )
(BLAST)
001: MLLPLFFFFL HLHLHLSSSS SISFPDFQII DVLQPPLTVT ATLPDFNNTH FSDESSSKYT LRLLHRDRFP SVTYRNHHHR LHARMRRDTD RVSAILRRIS
101: GKVIPSSDSR YEVNDFGSDI VSGMDQGSGE YFVRIGVGSP PRDQYMVIDS GSDMVWVQCQ PCKLCYKQSD PVFDPAKSGS YTGVSCGSSV CDRIENSGCH
201: SGGCRYEVMY GDGSYTKGTL ALETLTFAKT VVRNVAMGCG HRNRGMFIGA AGLLGIGGGS MSFVGQLSGQ TGGAFGYCLV SRGTDSTGSL VFGREALPVG
301: ASWVPLVRNP RAPSFYYVGL KGLGVGGVRI PLPDGVFDLT ETGDGGVVMD TGTAVTRLPT AAYVAFRDGF KSQTANLPRA SGVSIFDTCY DLSGFVSVRV
401: PTVSFYFTEG PVLTLPARNF LMPVDDSGTY CFAFAASPTG LSIIGNIQQE GIQVSFDGAN GFVGFGPNVC
Arabidopsis Description
ASPG2Protein ASPARTIC PROTEASE IN GUARD CELL 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHE3]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.