Factsheet for Bra033271.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra023972.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01300.1	Bra023972.1-P	AT4G31920.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90023	Canola	vacuole	99.58	99.58
CDY15187	Canola	vacuole	98.75	98.75
AT1G01300.1	Thale cress	vacuole	90.44	89.69
KRG97194	Soybean	endoplasmic reticulum	71.73	73.09
KRH68920	Soybean	nucleus	69.44	72.45
KRH47900	Soybean	nucleus	67.98	69.13
KRH06457	Soybean	endoplasmic reticulum, vacuole	68.4	69.12
PGSC0003DMT400000651	Potato	vacuole	68.81	68.96
VIT_15s0046g00360.t01	Wine grape	extracellular	70.06	68.92
Solyc01g096040.2.1	Tomato	nucleus, plastid	68.4	68.4
Solyc10g009410.1.1	Tomato	extracellular	62.99	66.16
Bra014420.1-P	Field mustard	vacuole	65.9	65.63
PGSC0003DMT400048585	Potato	vacuole	62.16	64.86
Bra003476.1-P	Field mustard	vacuole	65.28	64.74
Bra010998.1-P	Field mustard	cytosol	41.58	55.71
Os01t0598600-01	Rice	nucleus	57.17	55.0
TraesCS3A01G214100.1	Wheat	nucleus	55.72	54.92
TraesCS3D01G216700.1	Wheat	vacuole	55.51	54.6
Zm00001d044390_P001	Maize	plasma membrane	53.85	53.4
HORVU3Hr1G052320.1	Barley	mitochondrion, plasma membrane, plastid, vacuole	55.93	53.37
Os05t0590000-01	Rice	extracellular	52.6	52.6
KXG22664	Sorghum	extracellular, plastid, vacuole	53.85	51.7
Bra035823.1-P	Field mustard	cytosol	37.21	51.59
EES01017	Sorghum	mitochondrion, plastid	55.3	51.35
TraesCS3B01G244800.1	Wheat	plastid	55.93	50.85
GSMUA_Achr3P31640_001	Banana	cytosol	58.84	50.36
TraesCS3A01G287800.1	Wheat	cytosol	35.97	48.46
Bra022325.1-P	Field mustard	plastid	48.65	47.66
Bra001707.1-P	Field mustard	extracellular, vacuole	48.44	46.69
Bra037580.1-P	Field mustard	vacuole	48.44	46.69
Bra012473.1-P	Field mustard	plasma membrane	46.78	46.2
EES16428	Sorghum	extracellular	46.15	44.94
OQU92922	Sorghum	vacuole	45.32	44.49
KXG24090	Sorghum	extracellular	45.11	43.84
Os01t0720000-00	Rice	vacuole	40.54	43.72
OQU79707	Sorghum	vacuole	44.91	42.94
KXG24092	Sorghum	vacuole	43.87	42.89
HORVU3Hr1G068330.1	Barley	plastid, vacuole	39.29	42.86
TraesCS3D01G287600.1	Wheat	vacuole	39.29	42.28
TraesCS3B01G322500.1	Wheat	vacuole	38.67	41.99
Zm00001d043617_P001	Maize	endoplasmic reticulum, extracellular, vacuole	39.29	41.81
KXG33265	Sorghum	vacuole	38.25	40.44
Bra028568.1-P	Field mustard	vacuole	35.34	35.64
Bra035139.1-P	Field mustard	plastid	15.38	34.58
Bra009007.1-P	Field mustard	plastid, vacuole	29.11	32.18
Bra004734.1-P	Field mustard	vacuole	32.22	29.69
Bra028569.1-P	Field mustard	extracellular	29.11	29.29
Bra003596.1-P	Field mustard	vacuole	29.52	29.16
Bra003363.1-P	Field mustard	vacuole	32.64	28.6
Bra009006.1-P	Field mustard	plasma membrane, plastid, vacuole	34.1	16.02

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	EnsemblPlantsGene:Bra033271	EnsemblPlants:Bra033271.1	EnsemblPlants:Bra033271.1-P
InterPro:CND41-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0005618
GO:GO:0005623	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009505
GO:GO:0009628	GO:GO:0016020	GO:GO:0016787	GO:GO:0019538	GO:GO:0030312	GO:GO:0080167
InterPro:IPR021109	InterPro:IPR033121	UniProt:M4EWT6	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543
PRINTS:PR00792	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF308	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630
SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	TMHMM:TMhelix	UniParc:UPI0002545151	SEG:seg

Description

AT1G01300 (E=2e-217) | aspartyl protease family protein

Coordinates

chrA10:+:4563291..4564736

Molecular Weight (calculated)

52023.0 Da

IEP (calculated)

9.717

GRAVY (calculated)

-0.098

Length

481 amino acids

Sequence
(BLAST)

001: MEGRRKALLY TLCFFFFSLP SLSSLPAYQT LVPTSHSLPS ASPTSFQPES EPVSESLIGS GSDSDSSITL NLDHIDALST NRTPEELFSS RLQRDSRRVK
101: SIATLAARIP RRNTTHAPRP GGFSSSVVSG LSQGSGEYFT RLGVGTPARY VYMVLDTGSD IVWLQCAPCR RCYSQSDPIF DPRKSRTYST IPCSSPLCRR
201: LDSAGCNTRR RTCLYQVSYG DGSFTVGDFA TETLTFRRNR VKGVAVGCGH DNEGLFVGAA GLLGLGKGRL SFPGQTGRRF NQKFSYCLVD RSASSKPSSV
301: VFGNAAVSRT AKFTPLLSNP KLDTFYYVEL LGISVGGTRV PGVAASLFKL DPIGNGGVII DSGTSVTRLV RPAYIAMRDA FRVGAKSLKR APDYSLFDTC
401: FDLSHQNEVK VPTVVLHFRG ADVSLPATNY LIPVDTNGKF CFAFAGTMSG LSIIGNIQQQ GFRVVYDLMG SRVGFAPRGC A

Best Arabidopsis Sequence Match ( AT1G01300.1 )
(BLAST)

001: MVGRRKALLF SLCFFFLSLP SFSSLPSFQT LFPNSHSLPC ASPVSFQPDS DSESLLESEF ESGSDSESSS SITLNLDHID ALSSNKTPDE LFSSRLQRDS
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA

Arabidopsis Description

APF2Aspartyl protease family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.