Factsheet for Bra023972.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra005738.1-P
Bra009543.1-P
Bra028552.1-P
Bra033271.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G31920.1	Bra033271.1-P	AT1G01300.1	18642946
AT4G31920.1	Bra005738.1-P	AT5G03230.1	18642946
AT4G31920.1	Bra009543.1-P	AT5G03230.1	18642946
AT4G31920.1	Bra028552.1-P	AT5G11090.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13465	Canola	nucleus	99.61	99.61
AT4G31920.1	Thale cress	nucleus	75.48	70.83
Bra032035.1-P	Field mustard	nucleus	65.25	58.18
Bra001641.1-P	Field mustard	cytosol	16.41	57.43
Bra001378.1-P	Field mustard	nucleus	7.53	39.8
Bra026635.1-P	Field mustard	nucleus	26.25	36.07
Solyc07g005140.2.1	Tomato	nucleus	43.44	33.83
PGSC0003DMT400020233	Potato	nucleus	46.14	33.8
Solyc12g010330.1.1	Tomato	nucleus	46.14	33.76
Bra037427.1-P	Field mustard	nucleus	17.37	32.97
Os02t0182100-01	Rice	nucleus	38.8	32.11
Zm00001d015521_P001	Maize	nucleus	38.42	31.54
EES06387	Sorghum	nucleus	38.22	31.38
GSMUA_Achr3P13400_001	Banana	nucleus	37.64	31.05
TraesCS6B01G174400.1	Wheat	nucleus	36.68	30.55
Bra001377.1-P	Field mustard	nucleus	7.92	30.37
HORVU6Hr1G028680.1	Barley	nucleus	36.49	30.34
TraesCS6A01G146200.3	Wheat	nucleus	36.49	29.53
TraesCS6D01G135500.3	Wheat	nucleus	36.49	29.3
PGSC0003DMT400008290	Potato	nucleus	43.05	28.85
Bra012743.1-P	Field mustard	nucleus	32.43	28.38
Bra004076.1-P	Field mustard	nucleus	27.8	28.29
Bra004245.1-P	Field mustard	nucleus	27.8	28.12
Bra033527.1-P	Field mustard	nucleus	31.85	26.07
Bra001643.1-P	Field mustard	nucleus	32.24	25.69
Bra022183.1-P	Field mustard	nucleus	32.63	24.82
Bra020390.1-P	Field mustard	nucleus	29.73	24.72
Bra020652.1-P	Field mustard	nucleus	19.88	23.36
Bra041027.1-P	Field mustard	nucleus	17.57	21.67
Bra014172.1-P	Field mustard	nucleus	18.34	21.16
Bra005837.1-P	Field mustard	nucleus	10.04	20.72
Bra032275.1-P	Field mustard	nucleus	19.88	20.4
Bra004593.1-P	Field mustard	nucleus	9.65	20.24
Bra009087.1-P	Field mustard	nucleus	10.42	20.22
Bra029866.1-P	Field mustard	nucleus	11.0	19.93
Bra018204.1-P	Field mustard	nucleus	10.42	17.76
Bra034144.1-P	Field mustard	nucleus	11.0	17.54
Bra033809.1-P	Field mustard	nucleus	9.27	16.84
Bra009284.1-P	Field mustard	nucleus	22.78	15.27
Bra005928.1-P	Field mustard	nucleus	21.43	14.62
Bra028705.1-P	Field mustard	nucleus	21.62	14.6

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	EnsemblPlantsGene:Bra023972	EnsemblPlants:Bra023972.1
EnsemblPlants:Bra023972.1-P	InterPro:CheY-like_superfamily	GO:GO:0000003	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009414
GO:GO:0009628	GO:GO:0009653	GO:GO:0009719	GO:GO:0009735	GO:GO:0009736	GO:GO:0009791
GO:GO:0009987	GO:GO:0010082	GO:GO:0010380	GO:GO:0010492	GO:GO:0031537	GO:GO:0040007
GO:GO:0048364	GO:GO:0048367	GO:GO:0071368	GO:GO:0080022	GO:GO:0080036	GO:GO:0080113
InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930	UniProt:M4E5B8	InterPro:Myb_dom	InterPro:Myb_dom_plants
PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874
PANTHER:PTHR43874:SF7	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0002540FDE	SEG:seg	:	:

Description

AT4G31920 (E=3e-178) ARR10 | ARR10 (ARABIDOPSIS RESPONSE REGULATOR 10); transcription factor/ two-component response regulator

Coordinates

chrA03:-:28526478..28528797

Molecular Weight (calculated)

57961.9 Da

IEP (calculated)

6.346

GRAVY (calculated)

-0.554

Length

518 amino acids

Sequence
(BLAST)

001: MTLEQDFEAV DQFPVGMRVL AVDDDQTCLR ILETLLHRCQ YHVTTTDSAQ TALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVKH GACDYLLKPV RIEELKNIWQ HVVRKSKFKK MKSIVINDDH SQGNSDQNGV KANRKRKDQF EEVEEEDEER GNENDDPTAQ KKPRVLWTRE
201: LHNKFLAAVD HLGVEKAQPK KILELMNVDK LTRENVASHL QKFRSALKKI TNEANQQANM AAIDSHFMQM SALKGLGGFH NQRQIPLGSG QFHGGAATMR
301: HYPLGRLNSF GGVFPHVSSS LPRNHNDGGY VLQGMPIPPL DDLNNKAFPS FTSQQSSLMV APNNQLVLQG HQQSSYPSLN PGLSPHFEIN KRLDDWSNAL
401: LSTNIPQSGV HSKPDALEWN HFCNSDAAQA GFIDPLQMKQ QPANNLGPMT DAQLLRSSNP IEGLFVGQQK LENGSMPSNA GSLDDIVNSM MPKEQSQAEL
501: FEGDLGFGWH NSSLRTCI

Best Arabidopsis Sequence Match ( AT4G31920.1 )
(BLAST)

001: MTMEQEIEVL DQFPVGMRVL AVDDDQTCLR ILQTLLQRCQ YHVTTTNQAQ TALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVKH GACDYLLKPV RIEELKNIWQ HVVRKSKLKK NKSNVSNGSG NCDKANRKRK EQYEEEEEEE RGNDNDDPTA QKKPRVLWTH ELHNKFLAAV
201: DHLGVERAVP KKILDLMNVD KLTRENVASH LQKFRVALKK VSDDAIQQAN RAAIDSHFMQ MNSQKGLGGF YHHHRGIPVG SGQFHGGTTM MRHYSSNRNL
301: GRLNSLGAGM FQPVSSSFPR NHNDGGNILQ GLPLEELQIN NNINRAFPSF TSQQNSPMVA PSNLLLLEGN PQSSSLPSNP GFSPHFEISK RLEHWSNAAL
401: STNIPQSDVH SKPDTLEWNA FCDSASPLVN PNLDTNPASL CRNTGFGSTN AAQTDFFYPL QMNQQPANNS GPVTEAQLFR SSNPNEGLLM GQQKLQSGLM
501: ASDAGSLDDI VNSLMTQEQS QSDFSEGDWD LDGLAHSEHA YEKLHFPFSL SA

Arabidopsis Description

ARR10Two-component response regulator ARR10 [Source:UniProtKB/Swiss-Prot;Acc:O49397]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.