Factsheet for Bra014172.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16482	Canola	nucleus	95.55	97.5
Bra032275.1-P	Field mustard	nucleus	59.02	52.48
AT1G49190.2	Thale cress	nucleus	50.78	36.66
Bra001641.1-P	Field mustard	cytosol	11.58	35.14
Bra041027.1-P	Field mustard	nucleus	32.07	34.29
VIT_11s0052g01160.t01	Wine grape	cytosol	15.14	31.48
Bra001378.1-P	Field mustard	nucleus	6.68	30.61
Bra001377.1-P	Field mustard	nucleus	9.13	30.37
Bra037427.1-P	Field mustard	nucleus	15.37	25.27
Zm00001d032784_P001	Maize	nucleus	18.49	24.63
GSMUA_Achr5P13050_001	Banana	cytosol	12.25	24.02
KXG38401	Sorghum	nucleus	18.49	23.92
Bra026635.1-P	Field mustard	nucleus	19.6	23.34
VIT_07s0005g01010.t01	Wine grape	nucleus	23.16	19.48
Bra020652.1-P	Field mustard	nucleus	18.71	19.05
Bra004076.1-P	Field mustard	nucleus	21.16	18.66
Bra004245.1-P	Field mustard	nucleus	21.16	18.55
PGSC0003DMT400090747	Potato	nucleus	22.94	18.43
Solyc12g099380.1.1	Tomato	nucleus	22.72	18.38
Bra023972.1-P	Field mustard	nucleus	21.16	18.34
Os10t0463400-01	Rice	nucleus	13.59	17.89
Bra012743.1-P	Field mustard	nucleus	23.39	17.74
Bra033527.1-P	Field mustard	nucleus	24.28	17.22
Bra001643.1-P	Field mustard	nucleus	24.05	16.62
Bra032035.1-P	Field mustard	nucleus	21.16	16.35
Bra033809.1-P	Field mustard	nucleus	10.02	15.79
Bra022183.1-P	Field mustard	nucleus	23.83	15.71
Bra005837.1-P	Field mustard	nucleus	8.69	15.54
Bra004593.1-P	Field mustard	nucleus	8.46	15.38
Bra018204.1-P	Field mustard	nucleus	10.02	14.8
Bra020390.1-P	Field mustard	nucleus	20.27	14.61
Bra009087.1-P	Field mustard	nucleus	8.02	13.48
Bra029866.1-P	Field mustard	nucleus	8.24	12.94
Bra034144.1-P	Field mustard	nucleus	8.46	11.69
Bra005928.1-P	Field mustard	nucleus	19.6	11.59
Bra009284.1-P	Field mustard	nucleus	18.71	10.87
Bra028705.1-P	Field mustard	nucleus	18.49	10.82
TraesCS7A01G539600.1	Wheat	nucleus	4.23	5.62
TraesCSU01G179800.1	Wheat	nucleus, plastid	1.11	1.51
TraesCSU01G196300.1	Wheat	nucleus, plastid	1.11	1.51

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	EnsemblPlantsGene:Bra014172	EnsemblPlants:Bra014172.1
EnsemblPlants:Bra014172.1-P	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR001789	UniProt:M4DCF8	InterPro:Myb_dom_plants
PFAM:PF00072	PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF23	SMART:SM00448	SUPFAM:SSF46689
SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0002546541	SEG:seg	:

Description

AT1G49190 (E=3e-057) ARR19 | ARR19 (ARABIDOPSIS RESPONSE REGULATOR 19); transcription factor/ two-component response regulator

Coordinates

chrA08:-:2817255..2818990

Molecular Weight (calculated)

51196.6 Da

IEP (calculated)

5.186

GRAVY (calculated)

-0.603

Length

449 amino acids

Sequence
(BLAST)

001: MSIAHITEDG DKALFLQQET SEINSPLNEF PPSTNVLVVD ANLSTLLDMK EIMERCAYHV TAYADAEEAI AFLTKCKHEI NIVIWDYHMP GINGLQALAI
101: IGSKMDLPVV IMSGDDQTES VMNAMVHGAC HCVMKPVRKE IIATIWQHIV RKRMMSKPGL VPPVVVHGDY SKQEKDDSVT VDQDDSEESI DKIEEKATQK
201: QTMICIEETQ PMQSHLVKSN GSDQDDDDSR SVRNYNYEQS IDKKKERDLK RPRISWTGDL QQKFLEAIDI VGGPKKASPK VLLKCLHDMN IEGLTRNNVS
301: SHLQKYRLSL EETKIPQQFP ETGWSSLSRP SPFLGMNNGF IAPTSLRNGP AVYPVQDNQY QNGYLAINNN QFVTNNMHGF PYSENDHHLQ QQHQQRQYQL
401: SNQMMNYMMR NEPQQAYNSI GLTDLEPNIY PSLPYYPNEF LFDGYNFSN

Best Arabidopsis Sequence Match ( AT1G49190.1 )
(BLAST)

001: MLVGKISGYE DNTRSLERET SEITSLLSQF PGNTNVLVVD TNFTTLLNMK QIMKQYAYQV SIETDAEKAL AFLTSCKHEI NIVIWDFHMP GIDGLQALKS
101: ITSKLDLPVV IMSDDNQTES VMKATFYGAC DYVVKPVKEE VMANIWQHIV RKRLIFKPDV APPKPRMTWS EVFQPVQSHL VPTDGLDRDH FDSITINGGN
201: GIQNMEKKQG KKPRKPRMTW TEELHQKFLE AIEIIGGIEK ANPKVLVECL QEMRIEGITR SNVASHLQKH RINLEENQIP QQTQGNGWAT AYGTLAPSLQ
301: GSDNVNTTIP SYLMNGPATL NQIQQNQYQN GFLTMNNNQI ITNPPPPLPY LDHHHQQQHQ SSPQFNYLMN NEELLQASGL SATDLELTYP SLPYDPQEYL
401: INGYNYN

Arabidopsis Description

RR19response regulator 19 [Source:TAIR;Acc:AT1G49190]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.