Factsheet for Os10t0463400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG38401	Sorghum	nucleus	48.97	48.13
Zm00001d032784_P001	Maize	nucleus	46.63	47.18
GSMUA_Achr5P13050_001	Banana	cytosol	14.96	22.27
VIT_11s0052g01160.t01	Wine grape	cytosol	13.2	20.83
Os01t0844900-01	Rice	nucleus	13.2	20.55
Os01t0971800-00	Rice	nucleus	13.78	19.75
Bra037427.1-P	Field mustard	nucleus	15.54	19.41
CDX86245	Canola	nucleus	15.54	19.41
CDY56439	Canola	nucleus	15.54	19.27
AT5G49240.1	Thale cress	cytoskeleton, cytosol, nucleus	15.54	18.15
CDX76652	Canola	nucleus	17.6	14.32
Bra041027.1-P	Field mustard	nucleus	17.6	14.29
CDY11437	Canola	nucleus	17.6	14.29
PGSC0003DMT400090747	Potato	nucleus	23.17	14.13
CDY16482	Canola	nucleus	18.18	14.09
CDY33920	Canola	nucleus	17.89	14.09
AT3G62670.1	Thale cress	nucleus	17.6	14.08
CDY05641	Canola	nucleus	18.18	13.9
Bra020652.1-P	Field mustard	nucleus	17.89	13.83
CDX77263	Canola	nucleus	18.18	13.78
Os01t0904700-01	Rice	nucleus	23.46	13.75
Bra014172.1-P	Field mustard	nucleus	17.89	13.59
Os02t0182100-01	Rice	nucleus	24.93	13.58
KRH60425	Soybean	nucleus	14.08	13.33
VIT_07s0005g01010.t01	Wine grape	nucleus	20.23	12.92
Bra032275.1-P	Field mustard	nucleus	19.06	12.87
CDY29358	Canola	nucleus	19.06	12.87
Solyc12g099380.1.1	Tomato	nucleus	20.82	12.79
Os02t0796500-01	Rice	nucleus	25.51	12.65
Os03t0224200-01	Rice	nucleus	25.22	12.45
CDY04335	Canola	nucleus	19.06	12.31
Os06t0183100-01	Rice	nucleus	24.93	12.21
Os05t0412000-00	Rice	nucleus	13.2	10.9
AT1G49190.2	Thale cress	nucleus	19.65	10.77
Os06t0647200-02	Rice	nucleus	21.7	10.72
TraesCS7A01G539600.1	Wheat	nucleus	4.69	4.73
TraesCSU01G179800.1	Wheat	nucleus, plastid	0.29	0.3
TraesCSU01G196300.1	Wheat	nucleus, plastid	0.29	0.3

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:107276289	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	ProteinID:AAN05536.1
ProteinID:AAP54164.2	EMBL:AP008207	ProteinID:BAC77078.1	ProteinID:BAC77079.1	ProteinID:BAT11189.1	InterPro:CheY-like_superfamily
ProteinID:EEE51097.1	GO:GO:0000003	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009719	GO:GO:0009736
GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0048576	InterPro:Homeobox-like_sf	InterPro:IPR001789
InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	EnsemblPlantsGene:Os10g0463400	EnsemblPlants:Os10t0463400-01	PFAM:PF00072
PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874	PANTHER:PTHR43874:SF27
UniProt:Q7Y0W5	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI00001A3717	RefSeq:XP_015613931.1	RefSeq:XP_015613932.1	RefSeq:XP_015613933.1
SEG:seg	:	:	:	:	:

Description

EARLINESS 1B-type response regulator, Floral inducer to promote short-day (SD) flowering pathway (Os10t0463400-01)

Coordinates

chr10:-:17076098..17081344

Molecular Weight (calculated)

38865.2 Da

IEP (calculated)

5.812

GRAVY (calculated)

-0.455

Length

341 amino acids

Sequence
(BLAST)

001: MDHRELWPYG LRVLVIDDDC SYLSVMEDLL LKCSYKVTTY KNVREAVPFI LDNPQIVDLV ISDAFFPTED GLLILQEVTS KFGIPTVIMA SSGDTNTVMK
101: YVANGAFDFL LKPVRIEELS NIWQHIFRKQ MQDHKNNNMV GNLEKPGHPP SILAMARATP ATTRSTATEA SLAPLENEVR DDMVNYNGEI TDIRDLGKSR
201: LTWTTQLHRQ FIAAVNHLGE DKAVPKKILG IMKVKHLTRE QVASHLQKYR MQLKKSIPTT SKHGATLSST ALDKTQDHPS RSQYFNQDGC KEIMDYSLPR
301: DDLSSGSECM LEELNDYSSE GFQDFRWDSD KQEYGPCFWN F

Best Arabidopsis Sequence Match ( AT1G67710.1 )
(BLAST)

001: MEKSGFSPVG LRVLVVDDDP TWLKILEKML KKCSYEVTTC GLAREALRLL RERKDGYDIV ISDVNMPDMD GFKLLEHVGL ELDLPVIMMS VDGETSRVMK
101: GVQHGACDYL LKPIRMKELK IIWQHVLRKK LQEVRDIEGC GYEGGADWIT RYDEAHFLGG GEDVSFGKKR KDFDFEKKLL QDESDPSSSS SKKARVVWSF
201: ELHHKFVNAV NQIGCDHKAG PKKILDLMNV PWLTRENVAS HLQKYRLYLS RLEKGKELKC YSGGVKNADS SPKDVEVNSG YQSPGRSSYV FSGGNSLIQK
301: ATEIDPKPLA SASLSDLNTD VIMPPKTKKT RIGFDPPISS SAFDSLLPWN DVPEVLESKP VLYENSFLQQ QPLPSQSSYV ANSAPSLMEE EMKPPYETPA
401: GGSSVNADEF LMPQDKIPTV TLQDLDPSAM KLQEFNTEAI LRSLNWELPE SHHSVSLDTD LDLTWLQGER FLANTGLQFQ DYSSSPSLLS ELPAHLNWYG
501: NERLPDPDEY SFMVDQGLFI S

Arabidopsis Description

ARR11Two-component response regulator [Source:UniProtKB/TrEMBL;Acc:Q0WRT0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.