Factsheet for Os06t0647200-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0182100-01	Rice	nucleus	28.99	31.95
GSMUA_Achr11P...	Banana	nucleus	26.38	28.8
Solyc07g005140.2.1	Tomato	nucleus	26.81	27.82
GSMUA_Achr2P05130_001	Banana	nucleus	25.51	27.33
GSMUA_Achr10P...	Banana	nucleus	25.8	27.26
VIT_04s0008g05900.t01	Wine grape	nucleus	27.1	26.98
KRH61694	Soybean	nucleus	25.07	26.37
KRH52361	Soybean	nucleus	26.09	25.86
KRH05273	Soybean	nucleus	24.78	25.64
PGSC0003DMT400020233	Potato	nucleus	26.23	25.6
Os02t0796500-01	Rice	nucleus	25.36	25.44
Solyc12g010330.1.1	Tomato	nucleus	26.09	25.42
KRH15779	Soybean	nucleus	24.64	25.3
Os01t0904700-01	Rice	nucleus	20.87	24.74
Os06t0183100-01	Rice	nucleus	24.06	23.85
PGSC0003DMT400008290	Potato	nucleus	26.67	23.8
Os01t0844900-01	Rice	nucleus	7.1	22.37
Os10t0463400-01	Rice	nucleus	10.72	21.7
Os03t0224200-01	Rice	nucleus	21.59	21.56
Os01t0971800-00	Rice	nucleus	6.67	19.33
Os05t0412000-00	Rice	nucleus	8.41	14.04

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	EntrezGene:4341665	UniProt:A0A0P0WZT0
ProteinID:BAS98875.1	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009719	GO:GO:0009736	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR001789
InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	EnsemblPlantsGene:Os06g0647200	EnsemblPlants:Os06t0647200-02	PFAM:PF00072
PFAM:PF00249	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874	PANTHER:PTHR43874:SF7	InterPro:SANT/Myb
SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0000ED9076
RefSeq:XP_015642402.1	SEG:seg	:	:	:	:

Description

B-TYPE RESPONSE REGULATOR 5Similar to Response regulator. (Os06t0647200-01);B-type response regulator, Cytokinin signaling (Os06t0647200-02)

Coordinates

chr6:+:26450761..26455305

Molecular Weight (calculated)

76022.1 Da

IEP (calculated)

5.601

GRAVY (calculated)

-0.519

Length

690 amino acids

Sequence
(BLAST)

001: MAATQATAAR KFPEGLRVLA VDDSPVCLML LEALLRRCKY QPTMTRDAAT ALRMLRERPG DFDLVISDVH MLDMDGFKLL ELIGLEMDLP VIMQSANGEL
101: ETMMKGVTHG ACDYLVKPVS LKDIQNIWQH VWRKRKLDIR NHNGGYNDGG ELVGATRTKR KYTRKMRNDG DNYGENKENM DSTLKRQRVV WTPELHRDFV
201: IAVHELGVDR AVPRKILRMM KVDYMTRENI ASHLQKYRLY LKRISTQTGM DPDQFPEKWK YMNELDALKN YCENGRYRLT PAIASSSSSN PFARMNSASA
301: LATNGFLPTH SVQLKNSQRN MAMGTVGHGG SPGNNPVFQP LQNSSNARKC FPSGPSGSSF ANISNGLVLD TDDSGSSYAG MFCKSMWETS NGSPSCHSGN
401: SSANKSNNGV SAPANQFQVQ SKFGFSALAN QFPVQSNCGF SAPANQYQVQ SNGGFSVPAN QFPVQSNGEF LAPTNQFPVQ YPEVNNQPLV QMNQSSTNHF
501: STIGNDYQFP DLANCSKYWQ PTAPSMFPDL GHNDGTSFRP SQANIANINQ LSSFAASSGQ EPMFGDELHG QMSPIMSTIS LSDFDDQMGS FNIGNDTSPA
601: EMMHDNFSLG SDSNISSSTP TDSSFGSTFP DFHLDSPEMP AQMLNGGDED GILLPVLDDT VDQQDLFDQL DENNGNFQSN SVVKALVFAS

Best Arabidopsis Sequence Match ( AT2G25180.1 )
(BLAST)

001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI

Arabidopsis Description

ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.