Factsheet for Os02t0182100-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0598600-01
Os01t0720000-00
Os02t0629000-01
Os04t0520700-01
Os05t0590000-01
Os10t0481000-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G31920.1	Os01t0598600-01	AT1G01300.1	18642946
AT4G31920.1	Os01t0720000-00	AT1G01300.1	18642946
AT4G31920.1	Os05t0590000-01	AT1G01300.1	18642946
AT4G31920.1	Os02t0629000-01	AT5G03230.1	18642946
AT4G31920.1	Os04t0520700-01	AT5G03230.1	18642946
AT4G31920.1	Os10t0481000-00	AT5G03230.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G174400.1	Wheat	nucleus	76.52	77.01
HORVU6Hr1G028680.1	Barley	nucleus	76.04	76.4
EES06387	Sorghum	nucleus	76.36	75.75
Zm00001d015521_P001	Maize	nucleus	75.88	75.28
TraesCS6A01G146200.3	Wheat	nucleus	75.56	73.91
TraesCS6D01G135500.3	Wheat	nucleus	75.4	73.18
GSMUA_Achr3P13400_001	Banana	nucleus	39.78	39.65
CDX87845	Canola	cytosol, extracellular	8.47	39.55
CDY70103	Canola	nucleus	36.1	39.17
Bra032035.1-P	Field mustard	nucleus	36.26	39.07
CDY35371	Canola	nucleus	36.26	39.07
CDY13465	Canola	nucleus	32.27	39.0
Bra023972.1-P	Field mustard	nucleus	32.11	38.8
CDX68803	Canola	nucleus	31.63	38.75
AT2G25180.1	Thale cress	nucleus	36.58	38.42
AT4G31920.1	Thale cress	nucleus	33.87	38.41
Solyc07g005140.2.1	Tomato	nucleus	40.73	38.35
CDX72337	Canola	nucleus	31.95	38.24
PGSC0003DMT400020233	Potato	nucleus	40.89	36.21
Solyc12g010330.1.1	Tomato	nucleus	40.73	36.02
Os02t0796500-01	Rice	nucleus	39.14	35.61
Os06t0183100-01	Rice	nucleus	38.5	34.63
PGSC0003DMT400008290	Potato	nucleus	40.89	33.12
Os06t0647200-02	Rice	nucleus	31.95	28.99
Os01t0904700-01	Rice	nucleus	26.84	28.87
Os03t0224200-01	Rice	nucleus	30.03	27.21
CDY49965	Canola	mitochondrion	14.38	26.71
Os10t0463400-01	Rice	nucleus	13.58	24.93
Os01t0844900-01	Rice	nucleus	8.63	24.66
Os01t0971800-00	Rice	nucleus	9.27	24.37
Os05t0412000-00	Rice	nucleus	10.22	15.5

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	EntrezGene:4328516	EMBL:AK100530
ProteinID:BAD25144.1	ProteinID:BAF08011.1	ProteinID:BAS77314.1	InterPro:CheY-like_superfamily	ProteinID:EEE56445.1	ProteinID:FAA00257.1
GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009719	GO:GO:0009736	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930
InterPro:Myb_dom	InterPro:Myb_dom_plants	EnsemblPlantsGene:Os02g0182100	EnsemblPlants:Os02t0182100-01	PFAM:PF00072	PFAM:PF00249
PIRSF:PIRSF036392	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874	PANTHER:PTHR43874:SF7	UniProt:Q6H805
InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver
TIGRFAMs:TIGR01557	UniParc:UPI00003B4379	RefSeq:XP_015626716.1	SEG:seg	:	:

Description

B-TYPE RESPONSE REGULATOR 4B-type response regulator, Cytokinin signaling (Os02t0182100-01)

Coordinates

chr2:-:4573831..4578257

Molecular Weight (calculated)

68403.1 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.602

Length

626 amino acids

Sequence
(BLAST)

001: MTVEERQGRV GGHGVSGGGG GRDQFPVGMR VLAVDDDPTC LKILENLLLR CQYHVTTTGQ AATALKLLRE NKDQFDLVIS DVHMPDMDGF KLLELVGLEM
101: DLPVIMLSAN GETQTVMKGI THGACDYLLK PVRLEQLRTI WQHVIRRKNC DAKNRGNDDD AGQKAQGMNN EGESIGANRN KRQSRKSRDE NGDDGDDSDE
201: NSNENGDSST QKKPRVVWSV ELHRKFVAAV NQLGIEKAVP KKILDLMNVE NITRENVASH LQKYRLYLKR LSTDASRQAN LAAAFGGRNP AYINMNSFGN
301: YNAYGRYRTV PTAGHTQANN ILTRMNSPSA FGVHGLLHSQ PIQLGHAQNN LSTSLNDLGG LNNGNMIRGA QMSTILTGPS GNSFPNISNG APLATANRSL
401: QPLESSNQQH LSRVHSSSAD PFSTLVGESP QFPDLGRTTN TWQTAVPSNI QDRGHNDNMS QATLHMNGPK IEPVSSFTSS NQIPLLGNEM QGQVASLASN
501: VPIAFNQDTS PFNYGSSTNS RDMLNNSHVF SNSSINTSLP NLSLDNPAVP RQTLDRGNTG IVSPMQDGRI HHQAVSNQLN YNDDLMRTTG LQRGLSGGLD
601: DIVVDMFRPD REDDGVPYID GDWELV

Best Arabidopsis Sequence Match ( AT4G31920.1 )
(BLAST)

001: MTMEQEIEVL DQFPVGMRVL AVDDDQTCLR ILQTLLQRCQ YHVTTTNQAQ TALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVKH GACDYLLKPV RIEELKNIWQ HVVRKSKLKK NKSNVSNGSG NCDKANRKRK EQYEEEEEEE RGNDNDDPTA QKKPRVLWTH ELHNKFLAAV
201: DHLGVERAVP KKILDLMNVD KLTRENVASH LQKFRVALKK VSDDAIQQAN RAAIDSHFMQ MNSQKGLGGF YHHHRGIPVG SGQFHGGTTM MRHYSSNRNL
301: GRLNSLGAGM FQPVSSSFPR NHNDGGNILQ GLPLEELQIN NNINRAFPSF TSQQNSPMVA PSNLLLLEGN PQSSSLPSNP GFSPHFEISK RLEHWSNAAL
401: STNIPQSDVH SKPDTLEWNA FCDSASPLVN PNLDTNPASL CRNTGFGSTN AAQTDFFYPL QMNQQPANNS GPVTEAQLFR SSNPNEGLLM GQQKLQSGLM
501: ASDAGSLDDI VNSLMTQEQS QSDFSEGDWD LDGLAHSEHA YEKLHFPFSL SA

Arabidopsis Description

ARR10Two-component response regulator ARR10 [Source:UniProtKB/Swiss-Prot;Acc:O49397]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.