Factsheet for AT2G25180.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70103	Canola	nucleus	83.22	85.96
CDY35371	Canola	nucleus	83.39	85.54
Bra032035.1-P	Field mustard	nucleus	83.22	85.37
AT4G31920.1	Thale cress	nucleus	59.73	64.49
Os02t0182100-01	Rice	nucleus	38.42	36.58
Solyc07g005140.2.1	Tomato	nucleus	40.77	36.54
Zm00001d015521_P001	Maize	nucleus	37.92	35.82
EES06387	Sorghum	nucleus	37.92	35.82
Solyc12g010330.1.1	Tomato	nucleus	42.28	35.59
PGSC0003DMT400020233	Potato	nucleus	41.78	35.22
TraesCS6B01G174400.1	Wheat	nucleus	36.58	35.05
HORVU6Hr1G028680.1	Barley	nucleus	36.41	34.83
GSMUA_Achr3P13400_001	Banana	nucleus	35.74	33.92
AT2G01760.2	Thale cress	nucleus	23.32	33.9
TraesCS6A01G146200.3	Wheat	nucleus	36.24	33.75
TraesCS6D01G135500.3	Wheat	nucleus	36.24	33.49
PGSC0003DMT400008290	Potato	nucleus	40.44	31.18
AT5G49240.1	Thale cress	cytoskeleton, cytosol, nucleus	15.27	31.16
AT1G67710.1	Thale cress	nucleus	26.17	29.94
AT3G16857.2	Thale cress	nucleus	31.04	26.81
AT5G58080.1	Thale cress	nucleus	26.34	24.72
AT5G05090.1	Thale cress	nucleus	10.57	23.68
AT5G59570.2	Thale cress	nucleus	11.74	23.49
AT3G62670.1	Thale cress	nucleus	16.11	22.54
AT2G40970.1	Thale cress	nucleus	9.23	22.18
AT3G46640.3	Thale cress	nucleus	11.41	20.99
AT3G10760.1	Thale cress	nucleus	11.41	20.3
AT2G27070.1	Thale cress	nucleus	17.79	18.53
AT5G07210.1	Thale cress	nucleus	18.46	17.71
AT1G49190.2	Thale cress	nucleus	17.28	16.56

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	EntrezGene:817056	ProteinID:AEC07667.1
Symbol:ARR12	ArrayExpress:AT2G25180	EnsemblPlantsGene:AT2G25180	RefSeq:AT2G25180	TAIR:AT2G25180	RefSeq:AT2G25180-TAIR-G
EnsemblPlants:AT2G25180.1	TAIR:AT2G25180.1	EMBL:BE522295	InterPro:CheY-like_superfamily	GO:GO:0000003	GO:GO:0000156
GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0004871
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009414	GO:GO:0009628	GO:GO:0009653
GO:GO:0009719	GO:GO:0009735	GO:GO:0009736	GO:GO:0009791	GO:GO:0009987	GO:GO:0010082
GO:GO:0010380	GO:GO:0010492	GO:GO:0031537	GO:GO:0040007	GO:GO:0048364	GO:GO:0048367
GO:GO:0071368	GO:GO:0080022	GO:GO:0080036	GO:GO:0080113	InterPro:Homeobox-like_sf	InterPro:IPR001789
InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	RefSeq:NP_180090.6	UniProt:P62598	PFAM:PF00072
PFAM:PF00249	PIRSF:PIRSF036392	PO:PO:0000013	PO:PO:0000025	PO:PO:0000036	PO:PO:0000037
PO:PO:0000230	PO:PO:0000282	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0003000	PO:PO:0004507	PO:PO:0005660	PO:PO:0006079	PO:PO:0006339
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874
PANTHER:PTHR43874:SF7	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0001A7B007	SEG:seg	:	:

Description

ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]

Coordinates

chr2:-:10724301..10727272

Molecular Weight (calculated)

65630.2 Da

IEP (calculated)

6.628

GRAVY (calculated)

-0.591

Length

596 amino acids

Sequence
(BLAST)

001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.