Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32725 | Canola | nucleus | 72.6 | 74.0 |
| Bra020390.1-P | Field mustard | nucleus | 72.6 | 74.0 |
| CDY02793 | Canola | nucleus | 72.76 | 73.8 |
| CDY02794 | Canola | nucleus | 53.7 | 71.49 |
| TraesCS7B01G408600.1 | Wheat | cytosol | 12.44 | 58.09 |
| TraesCS7D01G499700.1 | Wheat | cytosol | 8.66 | 51.4 |
| TraesCS7A01G510400.1 | Wheat | cytosol | 6.61 | 50.0 |
| TraesCS7A01G539700.1 | Wheat | cytosol, nucleus, plastid | 8.5 | 48.65 |
| TraesCS7B01G421000.1 | Wheat | cytosol | 8.03 | 47.66 |
| TraesCS7B01G420800.1 | Wheat | cytosol | 7.87 | 46.73 |
| Zm00001d036803_P001 | Maize | cytosol | 7.56 | 45.28 |
| KRH16193 | Soybean | nucleus | 14.33 | 45.05 |
| KXG20365 | Sorghum | cytosol | 6.93 | 40.74 |
| KRH33116 | Soybean | cytosol | 18.11 | 40.35 |
| HORVU7Hr1G112860.2 | Barley | cytosol | 13.07 | 39.52 |
| HORVU7Hr1G112830.1 | Barley | cytosol, nucleus | 8.98 | 33.53 |
| AT5G49240.1 | Thale cress | cytoskeleton, cytosol, nucleus | 14.49 | 31.51 |
| AT2G01760.2 | Thale cress | nucleus | 19.53 | 30.24 |
| GSMUA_Achr10P... | Banana | nucleus | 20.32 | 29.72 |
| HORVU7Hr1G114130.2 | Barley | nucleus | 20.94 | 27.14 |
| TraesCS7D01G489600.1 | Wheat | nucleus | 21.42 | 27.09 |
| AT4G31920.1 | Thale cress | nucleus | 23.31 | 26.81 |
| AT2G25180.1 | Thale cress | nucleus | 24.72 | 26.34 |
| OQU78916 | Sorghum | nucleus | 22.83 | 26.32 |
| Solyc12g010330.1.1 | Tomato | nucleus | 28.66 | 25.71 |
| PGSC0003DMT400020233 | Potato | nucleus | 28.35 | 25.46 |
| TraesCS7D01G499600.1 | Wheat | nucleus | 19.84 | 25.4 |
| AT1G67710.1 | Thale cress | nucleus | 20.79 | 25.34 |
| TraesCS7A01G510300.1 | Wheat | nucleus | 19.84 | 25.25 |
| AT2G40970.1 | Thale cress | nucleus | 9.76 | 25.0 |
| TraesCS7B01G420900.1 | Wheat | nucleus | 19.37 | 24.85 |
| Solyc07g005140.2.1 | Tomato | nucleus | 25.98 | 24.81 |
| TraesCS3B01G517000.1 | Wheat | nucleus | 22.2 | 24.69 |
| TraesCS7A01G502300.1 | Wheat | nucleus | 21.89 | 24.52 |
| TraesCS3A01G473600.1 | Wheat | nucleus | 21.73 | 24.17 |
| TraesCS7B01G422000.1 | Wheat | nucleus | 21.42 | 24.16 |
| TraesCS7D01G500600.1 | Wheat | nucleus | 21.42 | 23.82 |
| TraesCS7D01G525900.1 | Wheat | nucleus | 21.57 | 23.66 |
| TraesCSU01G040900.1 | Wheat | nucleus | 21.1 | 23.47 |
| TraesCS7A01G511100.1 | Wheat | nucleus | 20.94 | 23.29 |
| TraesCS7A01G511300.1 | Wheat | nucleus | 20.94 | 23.29 |
| KRH03086 | Soybean | nucleus | 24.72 | 23.05 |
| TraesCS7B01G422100.1 | Wheat | nucleus | 20.63 | 22.94 |
| Zm00001d036802_P001 | Maize | nucleus | 14.02 | 22.94 |
| Zm00001d046755_P001 | Maize | nucleus | 23.94 | 22.65 |
| AT5G05090.1 | Thale cress | nucleus | 9.45 | 22.56 |
| HORVU7Hr1G118290.2 | Barley | nucleus | 21.42 | 22.55 |
| KRH20086 | Soybean | nucleus | 24.09 | 22.5 |
| TraesCS7B01G408700.1 | Wheat | nucleus | 22.05 | 22.22 |
| HORVU7Hr1G114450.2 | Barley | nucleus | 20.63 | 22.02 |
| AT3G16857.2 | Thale cress | nucleus | 23.78 | 21.88 |
| KXG20361 | Sorghum | nucleus | 22.99 | 21.76 |
| KXG20364 | Sorghum | nucleus | 22.83 | 21.71 |
| PGSC0003DMT400008290 | Potato | nucleus | 26.14 | 21.47 |
| TraesCS3A01G473800.1 | Wheat | nucleus | 19.06 | 21.45 |
| EES09342 | Sorghum | nucleus | 23.31 | 21.33 |
| AT3G62670.1 | Thale cress | nucleus | 14.17 | 21.13 |
| AT5G59570.2 | Thale cress | nucleus | 9.76 | 20.81 |
| TraesCSU01G105200.1 | Wheat | nucleus | 16.69 | 20.38 |
| OQU76785 | Sorghum | nucleus | 17.17 | 20.11 |
| HORVU7Hr1G112840.1 | Barley | nucleus | 20.63 | 20.06 |
| HORVU7Hr1G112890.1 | Barley | nucleus | 20.94 | 19.7 |
| AT3G10760.1 | Thale cress | nucleus | 10.08 | 19.1 |
| AT3G46640.3 | Thale cress | nucleus | 9.29 | 18.21 |
| EER90120 | Sorghum | nucleus | 13.39 | 15.6 |
| AT2G27070.1 | Thale cress | nucleus | 13.7 | 15.21 |
| AT5G07210.1 | Thale cress | nucleus | 14.65 | 14.98 |
| AT1G49190.2 | Thale cress | nucleus | 14.02 | 14.31 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | EntrezGene:835920 | ProteinID:AED96995.2 |
| Symbol:ARR18 | ArrayExpress:AT5G58080 | EnsemblPlantsGene:AT5G58080 | RefSeq:AT5G58080 | TAIR:AT5G58080 | RefSeq:AT5G58080-TAIR-G |
| EnsemblPlants:AT5G58080.1 | TAIR:AT5G58080.1 | Unigene:At.29298 | ProteinID:BAB10999.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 |
| GO:GO:0009736 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Homeobox-like_sf | InterPro:IPR001789 |
| InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | RefSeq:NP_200616.4 | PFAM:PF00072 | PFAM:PF00249 |
| PIRSF:PIRSF036392 | PO:PO:0006079 | PO:PO:0006339 | PO:PO:0007611 | PO:PO:0009031 | PO:PO:0009066 |
| PFscan:PS50110 | PFscan:PS51294 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF7 | UniProt:Q9FGT7 | InterPro:Response_reg_B-typ_pln |
| InterPro:SANT/Myb | SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 |
| UniParc:UPI00003BF79C | SEG:seg | : | : | : | : |
Description
ARR18Two-component response regulator ARR18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGT7]
Coordinates
chr5:-:23501605..23504169
Molecular Weight (calculated)
70411.0 Da
IEP (calculated)
5.054
GRAVY (calculated)
-0.604
Length
635 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFGSTEDGR HDKFPVGMRV LAVDDNPTCL RKLEELLLRC KYHVTKTMES RKALEMLREN SNMFDLVISD VEMPDTDGFK LLEIGLEMDL PVIMLSAHSD
101: YDSVMKGIIH GACDYLVKPV GLKELQNIWH HVVKKNIKSY AKLLPPSESD SVPSASRKRK DKVNDSGDED DSDREEDDGE GSEQDGDGSG TRKKPRVVWS
201: QELHQKFVSA VQQLGLDKAV PKKILDLMSI EGLTRENVAS HLQKYRLYLK KIDEGQQQNM TPDAFGTRDS SYFQMAQLDG LRDFTAARQI PSSGLLSRSH
301: LTKLQPPMYS SINLQGMNSS SFIQQGHHQN SSNSANPFGT YHSTLSPRIQ NVNLFQRTSS PLEPLQFPRS KSYIGDFKGL GDRAIGGSFL DTCMPFGSSS
401: TSLPSASTNP LMLQANYTQP LHIASDGIQP CIEGTPSNSA SPNISFQGLS RFPGHSWQGN LNTTRFPPSS LPLNLAFLPD QVTCAGNNLG DCTSLVSAEN
501: PGGEMQCDPQ LLGGFMQNVN PLGGQKWEQQ NCTMLNNPFG NIEYPLPADN MVFRDNNSTR SKGLDESLMN PIDNSQEYVG KATTMLDPEM KSGKPENDNQ
601: HDVFDDIMNE MMKQEENNGM VPVATRFGFD SFPPP
101: YDSVMKGIIH GACDYLVKPV GLKELQNIWH HVVKKNIKSY AKLLPPSESD SVPSASRKRK DKVNDSGDED DSDREEDDGE GSEQDGDGSG TRKKPRVVWS
201: QELHQKFVSA VQQLGLDKAV PKKILDLMSI EGLTRENVAS HLQKYRLYLK KIDEGQQQNM TPDAFGTRDS SYFQMAQLDG LRDFTAARQI PSSGLLSRSH
301: LTKLQPPMYS SINLQGMNSS SFIQQGHHQN SSNSANPFGT YHSTLSPRIQ NVNLFQRTSS PLEPLQFPRS KSYIGDFKGL GDRAIGGSFL DTCMPFGSSS
401: TSLPSASTNP LMLQANYTQP LHIASDGIQP CIEGTPSNSA SPNISFQGLS RFPGHSWQGN LNTTRFPPSS LPLNLAFLPD QVTCAGNNLG DCTSLVSAEN
501: PGGEMQCDPQ LLGGFMQNVN PLGGQKWEQQ NCTMLNNPFG NIEYPLPADN MVFRDNNSTR SKGLDESLMN PIDNSQEYVG KATTMLDPEM KSGKPENDNQ
601: HDVFDDIMNE MMKQEENNGM VPVATRFGFD SFPPP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.