Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G511100.1 | Wheat | nucleus | 92.88 | 84.59 |
| TraesCS7A01G511300.1 | Wheat | nucleus | 92.69 | 84.41 |
| TraesCS7B01G422100.1 | Wheat | nucleus | 90.38 | 82.31 |
| TraesCSU01G040900.1 | Wheat | nucleus | 84.62 | 77.06 |
| HORVU7Hr1G114450.2 | Barley | nucleus | 65.58 | 57.31 |
| TraesCSU01G196300.1 | Wheat | nucleus, plastid | 24.81 | 38.97 |
| TraesCSU01G179800.1 | Wheat | nucleus, plastid | 24.81 | 38.97 |
| KRH33116 | Soybean | cytosol | 14.23 | 25.96 |
| KRH16193 | Soybean | nucleus | 10.0 | 25.74 |
| Solyc07g005140.2.1 | Tomato | nucleus | 27.5 | 21.5 |
| GSMUA_Achr10P... | Banana | nucleus | 17.12 | 20.51 |
| PGSC0003DMT400020233 | Potato | nucleus | 26.35 | 19.38 |
| KRH03086 | Soybean | nucleus | 25.19 | 19.24 |
| Solyc12g010330.1.1 | Tomato | nucleus | 25.77 | 18.93 |
| PGSC0003DMT400008290 | Potato | nucleus | 27.5 | 18.5 |
| CDY02794 | Canola | nucleus | 16.92 | 18.45 |
| KRH20086 | Soybean | nucleus | 23.08 | 17.65 |
| AT5G58080.1 | Thale cress | nucleus | 20.38 | 16.69 |
| CDY32725 | Canola | nucleus | 19.81 | 16.53 |
| Bra020390.1-P | Field mustard | nucleus | 19.81 | 16.53 |
| CDY02793 | Canola | nucleus | 19.81 | 16.45 |
Protein Annotations
| EnsemblPlants:TraesCSU01G105200.1 | EnsemblPlantsGene:TraesCSU01G105200 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:CheY-like_superfamily | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants |
| InterPro:SANT/Myb | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF7 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg |
| SUPFAM:SSF46689 | SUPFAM:SSF52172 | TIGRFAMs:TIGR01557 | MapMan:11.4.2.4 | MapMan:15.5.23 | : |
Description
No Description!
Coordinates
chrUn:-:92704422..92708228
Molecular Weight (calculated)
57886.0 Da
IEP (calculated)
6.920
GRAVY (calculated)
-0.587
Length
520 amino acids
Sequence
(BLAST)
(BLAST)
001: MATMSGDRGQ MMEDAAEDKF PEGLRVLVVD DDRVCLKVLE ALLRHCKYQL LSVDCDKKVV IKGIDHGASD FMVKPVRTHE LKNIWQHVQR WRNPKAISHI
101: SDHDNDVQRV QPATTDKSKY SGNKRNVGDD SSENNEGTHI SAIHRKPRMT WTIALHNKFL EAINQIGLDR AVPKKILELM NVDYLSRENI ASHLQKYRLH
201: LKRVKSNPSG DAYERWNSSY NMNNKGNFMH NHEHGRWIVS FGDTASWSTN KYGSTGHLAP PMNIQSNLYM GSYLHDGRMP KYVGKLPSDA RRFTGFADPP
301: VSLYDNIPNK IMSDEFPSFN YSNSCSDIMR GKLMEISKGK SPSILQSSFA NTTVGGGRSL VASQVNFPHS NQLESYAMSS GRLPLQNEKA PFISNTTSVG
401: GFTEQMAPFN IASNISSVGT MLNGSSALDA SRTSTNDTHL GNGGRTTSML HNLQTDDFVS LTRLHDGGDG ASIVPTQEGT LNQQPLNDHL NEISAFSMDD
501: IFSNMHVEDF TGDDAIVEEA
101: SDHDNDVQRV QPATTDKSKY SGNKRNVGDD SSENNEGTHI SAIHRKPRMT WTIALHNKFL EAINQIGLDR AVPKKILELM NVDYLSRENI ASHLQKYRLH
201: LKRVKSNPSG DAYERWNSSY NMNNKGNFMH NHEHGRWIVS FGDTASWSTN KYGSTGHLAP PMNIQSNLYM GSYLHDGRMP KYVGKLPSDA RRFTGFADPP
301: VSLYDNIPNK IMSDEFPSFN YSNSCSDIMR GKLMEISKGK SPSILQSSFA NTTVGGGRSL VASQVNFPHS NQLESYAMSS GRLPLQNEKA PFISNTTSVG
401: GFTEQMAPFN IASNISSVGT MLNGSSALDA SRTSTNDTHL GNGGRTTSML HNLQTDDFVS LTRLHDGGDG ASIVPTQEGT LNQQPLNDHL NEISAFSMDD
501: IFSNMHVEDF TGDDAIVEEA
001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI
Arabidopsis Description
ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.