Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G473600.1 | Wheat | nucleus | 91.07 | 91.07 |
| TraesCS3B01G517000.1 | Wheat | nucleus | 89.49 | 89.49 |
| TraesCS7B01G422000.1 | Wheat | nucleus | 85.99 | 87.21 |
| TraesCSU01G105200.1 | Wheat | nucleus | 77.06 | 84.62 |
| TraesCS3A01G473800.1 | Wheat | nucleus | 78.28 | 79.26 |
| HORVU7Hr1G114450.2 | Barley | nucleus | 68.83 | 66.05 |
| TraesCSU01G196300.1 | Wheat | nucleus, plastid | 24.17 | 41.69 |
| TraesCSU01G179800.1 | Wheat | nucleus, plastid | 24.17 | 41.69 |
| KRH16193 | Soybean | nucleus | 12.78 | 36.14 |
| KRH33116 | Soybean | cytosol | 16.99 | 34.04 |
| GSMUA_Achr10P... | Banana | nucleus | 20.49 | 26.96 |
| Solyc07g005140.2.1 | Tomato | nucleus | 30.65 | 26.32 |
| PGSC0003DMT400020233 | Potato | nucleus | 30.47 | 24.61 |
| Solyc12g010330.1.1 | Tomato | nucleus | 29.77 | 24.01 |
| CDY02794 | Canola | nucleus | 19.79 | 23.69 |
| KRH03086 | Soybean | nucleus | 27.5 | 23.05 |
| PGSC0003DMT400008290 | Potato | nucleus | 30.65 | 22.64 |
| KRH20086 | Soybean | nucleus | 25.92 | 21.76 |
| AT5G58080.1 | Thale cress | nucleus | 23.47 | 21.1 |
| CDY32725 | Canola | nucleus | 22.77 | 20.87 |
| Bra020390.1-P | Field mustard | nucleus | 22.77 | 20.87 |
| CDY02793 | Canola | nucleus | 22.77 | 20.77 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | InterPro:CheY-like_superfamily | GO:GO:0000160 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00072 |
| PIRSF:PIRSF036392 | PFscan:PS50110 | PFscan:PS51294 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF7 | InterPro:Response_reg_B-typ_pln |
| SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 | EnsemblPlantsGene:TraesCSU01G040900 |
| EnsemblPlants:TraesCSU01G040900.1 | TIGR:cd00156 | : | : | : | : |
Description
No Description!
Coordinates
chrUn:+:33118346..33123374
Molecular Weight (calculated)
63771.3 Da
IEP (calculated)
5.985
GRAVY (calculated)
-0.548
Length
571 amino acids
Sequence
(BLAST)
(BLAST)
001: MATMGGDRRQ MMEDAAEDKF PEGLRILVVD DDRVCLKVLE ALLRRCNYQP TPVRDAKTAL RMLMAGKQQF DLVITDVRMP DMDGFKLLEL IRLEMDLPVI
101: MISVDCDKRV VMKGIDHGAS DFMVKPVCTH ELKNIWQHVQ RWRNPKAISH ISDHDNDVQR VQPATADKSK LSGHKRNAGD DSNKHNESTS ISTTHRKPRV
201: TWTIKLHNKF LEAINQIGLD RAVPEKVLEL MNVDCLSREN IASHLQKYRL HLKRVNSNPS GDAHERWNSS YNMNNKGNFM HNHEHGRWGA SSGDTASWST
301: NNYGATGHLA PPMNTQSNFY MGSYLHDGRM PRYVGKQPSD AIRFTGFGDP PVSLYNNIPN EIMLDEFPSL NYSNSYEDLM CGMLMEISKG KTPCSHQSSF
401: ANTTVGGGRS LAASQVNFPQ INQLESYAMS CSQLPMQNEK APFISNTTSA GGFTEQMAPF NMASNTSSVG MMLNGSSALD ASRTSTKDTH VVNSERTTSM
501: LHNLQTDDFF SLTQLLDGGD GGSILPMQEG TLDQQPLNDQ LNEINAFSVD DIFSNMNLED FTGDDAIVEE A
101: MISVDCDKRV VMKGIDHGAS DFMVKPVCTH ELKNIWQHVQ RWRNPKAISH ISDHDNDVQR VQPATADKSK LSGHKRNAGD DSNKHNESTS ISTTHRKPRV
201: TWTIKLHNKF LEAINQIGLD RAVPEKVLEL MNVDCLSREN IASHLQKYRL HLKRVNSNPS GDAHERWNSS YNMNNKGNFM HNHEHGRWGA SSGDTASWST
301: NNYGATGHLA PPMNTQSNFY MGSYLHDGRM PRYVGKQPSD AIRFTGFGDP PVSLYNNIPN EIMLDEFPSL NYSNSYEDLM CGMLMEISKG KTPCSHQSSF
401: ANTTVGGGRS LAASQVNFPQ INQLESYAMS CSQLPMQNEK APFISNTTSA GGFTEQMAPF NMASNTSSVG MMLNGSSALD ASRTSTKDTH VVNSERTTSM
501: LHNLQTDDFF SLTQLLDGGD GGSILPMQEG TLDQQPLNDQ LNEINAFSVD DIFSNMNLED FTGDDAIVEE A
001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI
Arabidopsis Description
ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.