Factsheet for Bra020390.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32725	Canola	nucleus	99.36	99.36
AT5G58080.1	Thale cress	nucleus	74.0	72.6
TraesCS7B01G408600.1	Wheat	cytosol	12.36	56.62
TraesCS7D01G499700.1	Wheat	cytosol	8.35	48.6
TraesCS7A01G539700.1	Wheat	cytosol, nucleus, plastid	8.51	47.75
TraesCS7A01G510400.1	Wheat	cytosol	6.42	47.62
Zm00001d036803_P001	Maize	cytosol	7.7	45.28
Bra001641.1-P	Field mustard	cytosol	10.75	45.27
TraesCS7B01G421000.1	Wheat	cytosol	7.7	44.86
TraesCS7B01G420800.1	Wheat	cytosol	7.54	43.93
Bra001378.1-P	Field mustard	nucleus	6.9	43.88
KRH16193	Soybean	nucleus	13.8	42.57
KXG20365	Sorghum	cytosol	7.06	40.74
HORVU7Hr1G112860.2	Barley	cytosol	13.32	39.52
KRH33116	Soybean	cytosol	17.82	38.95
Bra026635.1-P	Field mustard	nucleus	19.58	32.36
HORVU7Hr1G112830.1	Barley	cytosol, nucleus	8.83	32.35
Bra037427.1-P	Field mustard	nucleus	13.48	30.77
Bra023972.1-P	Field mustard	nucleus	24.72	29.73
GSMUA_Achr10P...	Banana	nucleus	20.71	29.72
Bra032035.1-P	Field mustard	nucleus	26.32	28.23
Bra001377.1-P	Field mustard	nucleus	6.1	28.15
Bra004076.1-P	Field mustard	nucleus	22.31	27.31
Bra004245.1-P	Field mustard	nucleus	21.83	26.56
OQU78916	Sorghum	nucleus	23.43	26.5
TraesCS7D01G489600.1	Wheat	nucleus	21.03	26.1
HORVU7Hr1G114130.2	Barley	nucleus	20.39	25.92
Bra012743.1-P	Field mustard	nucleus	23.6	24.83
Solyc07g005140.2.1	Tomato	nucleus	26.48	24.81
PGSC0003DMT400020233	Potato	nucleus	27.93	24.61
TraesCS7D01G499600.1	Wheat	nucleus	19.58	24.6
Solyc12g010330.1.1	Tomato	nucleus	27.93	24.58
TraesCS7B01G420900.1	Wheat	nucleus	19.42	24.44
TraesCS7A01G510300.1	Wheat	nucleus	19.42	24.25
TraesCS3B01G517000.1	Wheat	nucleus	21.99	23.99
Bra033527.1-P	Field mustard	nucleus	24.24	23.85
TraesCS7B01G422000.1	Wheat	nucleus	21.51	23.8
TraesCS3A01G473600.1	Wheat	nucleus	21.51	23.47
TraesCS7D01G500600.1	Wheat	nucleus	21.35	23.29
Zm00001d046755_P001	Maize	nucleus	25.04	23.25
TraesCS7A01G511300.1	Wheat	nucleus	21.19	23.12
Bra005837.1-P	Field mustard	nucleus	9.31	23.11
Bra004593.1-P	Field mustard	nucleus	9.15	23.08
TraesCS7D01G525900.1	Wheat	nucleus	21.35	22.97
TraesCS7A01G511100.1	Wheat	nucleus	21.03	22.94
Zm00001d036802_P001	Maize	nucleus	14.29	22.94
TraesCS7A01G502300.1	Wheat	nucleus	20.87	22.93
TraesCSU01G040900.1	Wheat	nucleus	20.87	22.77
TraesCS7B01G422100.1	Wheat	nucleus	20.55	22.42
KRH03086	Soybean	nucleus	24.4	22.32
Bra001643.1-P	Field mustard	nucleus	23.27	22.31
HORVU7Hr1G118290.2	Barley	nucleus	21.51	22.22
Bra020652.1-P	Field mustard	nucleus	15.73	22.22
Bra022183.1-P	Field mustard	nucleus	24.24	22.17
TraesCS7B01G408700.1	Wheat	nucleus	22.31	22.06
KRH20086	Soybean	nucleus	23.76	21.76
Bra041027.1-P	Field mustard	nucleus	14.61	21.67
KXG20361	Sorghum	nucleus	23.27	21.61
KXG20364	Sorghum	nucleus	22.95	21.41
Bra009087.1-P	Field mustard	nucleus	9.15	21.35
PGSC0003DMT400008290	Potato	nucleus	26.48	21.35
EES09342	Sorghum	nucleus	23.6	21.18
HORVU7Hr1G114450.2	Barley	nucleus	20.06	21.01
TraesCS3A01G473800.1	Wheat	nucleus	18.78	20.74
Bra014172.1-P	Field mustard	nucleus	14.61	20.27
Bra029866.1-P	Field mustard	nucleus	9.15	19.93
TraesCSU01G105200.1	Wheat	nucleus	16.53	19.81
HORVU7Hr1G112840.1	Barley	nucleus	20.39	19.45
HORVU7Hr1G112890.1	Barley	nucleus	20.55	18.96
Bra032275.1-P	Field mustard	nucleus	15.25	18.81
Bra034144.1-P	Field mustard	nucleus	9.79	18.77
OQU76785	Sorghum	nucleus	16.05	18.45
Bra018204.1-P	Field mustard	nucleus	8.99	18.42
Bra033809.1-P	Field mustard	nucleus	8.19	17.89
EER90120	Sorghum	nucleus	12.52	14.31
Bra009284.1-P	Field mustard	nucleus	17.18	13.84
Bra005928.1-P	Field mustard	nucleus	16.21	13.31
Bra028705.1-P	Field mustard	nucleus	16.05	13.04

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	EnsemblPlantsGene:Bra020390	EnsemblPlants:Bra020390.1
EnsemblPlants:Bra020390.1-P	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930
UniProt:M4DV47	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392
PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874	PANTHER:PTHR43874:SF7	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb
SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0002543071
SEG:seg	:	:	:	:	:

Description

AT5G58080 (E=1e-201) ARR18 | ARR18 (ARABIDOPSIS RESPONSE REGULATOR 18); transcription factor/ two-component response regulator

Coordinates

chrA02:+:6522995..6525551

Molecular Weight (calculated)

69475.5 Da

IEP (calculated)

5.470

GRAVY (calculated)

-0.615

Length

623 amino acids

Sequence
(BLAST)

001: MESVSNEEGR SDQFPVGMRV LAVDDNPTCL RKLEELLLRC KYHVTKTMES KKALEMLREK SNMFDLVISD VEMPDTDGFK LLEIGLEMDL PVIMLSAHSD
101: YDSVMKGIIH GACDYLVKPV SLKELRNIWQ HVVKKNIGSY KKIIAPSRHL LPTSEYAPRG SGKRKEKADD SGDGDDDSDR DDEEDGSEQD GDESSSRKKR
201: RVVWSQELHQ KFVHAVQQLG LDKAVPKKIL DYMNIEGLTR ENVASHLQKY RLYLKKLDEG QQHNMSQDAF GSRDSSYFHM AQLEGLRDYS STRQLSSSSL
301: LTRSSLTKFH PSVYSSVNLQ GSNSSSFIPP GHHQSSSSSA NPFGTYHSPL LARSQNVNLS PLEPLQFPRS KCSPYMGDFK GIADRGIGSS FLDSRMSFGS
401: SSTSLPCATS NNLMLQENFG VSDGNQSCLN GLSSFPSHHS WQGNLKTTTR FPSHSLPLNH AFGQDQMTCG GTGLGDYNTS LVSADSHVGV LQCEPPFLGD
501: FMQNMNTHKW EEQNCTMMNN TFGNVDYPLP VDNNMVFRDN NATRSKGVDD SLMMSPIEDS ATTLNSRECV GNVTMMDPEM RSSTKLENDL VDNQNDVFDD
601: IMNEMLKQDE NNGMVSVAAR FGL

Best Arabidopsis Sequence Match ( AT5G58080.1 )
(BLAST)

001: MEFGSTEDGR HDKFPVGMRV LAVDDNPTCL RKLEELLLRC KYHVTKTMES RKALEMLREN SNMFDLVISD VEMPDTDGFK LLEIGLEMDL PVIMLSAHSD
101: YDSVMKGIIH GACDYLVKPV GLKELQNIWH HVVKKNIKSY AKLLPPSESD SVPSASRKRK DKVNDSGDED DSDREEDDGE GSEQDGDGSG TRKKPRVVWS
201: QELHQKFVSA VQQLGLDKAV PKKILDLMSI EGLTRENVAS HLQKYRLYLK KIDEGQQQNM TPDAFGTRDS SYFQMAQLDG LRDFTAARQI PSSGLLSRSH
301: LTKLQPPMYS SINLQGMNSS SFIQQGHHQN SSNSANPFGT YHSTLSPRIQ NVNLFQRTSS PLEPLQFPRS KSYIGDFKGL GDRAIGGSFL DTCMPFGSSS
401: TSLPSASTNP LMLQANYTQP LHIASDGIQP CIEGTPSNSA SPNISFQGLS RFPGHSWQGN LNTTRFPPSS LPLNLAFLPD QVTCAGNNLG DCTSLVSAEN
501: PGGEMQCDPQ LLGGFMQNVN PLGGQKWEQQ NCTMLNNPFG NIEYPLPADN MVFRDNNSTR SKGLDESLMN PIDNSQEYVG KATTMLDPEM KSGKPENDNQ
601: HDVFDDIMNE MMKQEENNGM VPVATRFGFD SFPPP

Arabidopsis Description

ARR18Two-component response regulator ARR18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGT7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.