Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G408600.1 | Wheat | cytosol | 19.68 | 91.18 |
| TraesCS7A01G502300.1 | Wheat | nucleus | 77.46 | 86.07 |
| TraesCS7D01G489600.1 | Wheat | nucleus | 67.78 | 85.06 |
| TraesCS7B01G421000.1 | Wheat | cytosol | 13.49 | 79.44 |
| TraesCS7B01G420800.1 | Wheat | cytosol | 13.17 | 77.57 |
| TraesCS7B01G461400.1 | Wheat | nucleus | 28.57 | 71.15 |
| HORVU7Hr1G114130.2 | Barley | nucleus | 52.22 | 67.14 |
| TraesCS7B01G420900.1 | Wheat | nucleus | 52.06 | 66.26 |
| TraesCS7B01G422000.1 | Wheat | nucleus | 55.4 | 61.99 |
| TraesCS3B01G517000.1 | Wheat | nucleus | 55.71 | 61.47 |
| TraesCS7B01G422100.1 | Wheat | nucleus | 54.44 | 60.07 |
| TraesCS7B01G461300.1 | Wheat | nucleus, plastid | 24.92 | 47.43 |
| KRH16193 | Soybean | nucleus | 12.54 | 39.11 |
| KRH33116 | Soybean | cytosol | 17.3 | 38.25 |
| TraesCS6B01G174400.1 | Wheat | nucleus | 30.16 | 30.55 |
| GSMUA_Achr10P... | Banana | nucleus | 18.57 | 26.96 |
| Solyc07g005140.2.1 | Tomato | nucleus | 28.41 | 26.92 |
| CDY02794 | Canola | nucleus | 19.84 | 26.21 |
| PGSC0003DMT400020233 | Potato | nucleus | 29.21 | 26.03 |
| Solyc12g010330.1.1 | Tomato | nucleus | 28.57 | 25.42 |
| TraesCS7B01G049000.1 | Wheat | nucleus | 25.08 | 25.32 |
| TraesCS7B01G049200.1 | Wheat | nucleus | 25.87 | 24.81 |
| KRH03086 | Soybean | nucleus | 26.67 | 24.67 |
| TraesCS6B01G392000.1 | Wheat | nucleus | 26.03 | 24.33 |
| KRH20086 | Soybean | nucleus | 25.56 | 23.68 |
| TraesCS3B01G423600.1 | Wheat | nucleus | 21.9 | 23.63 |
| PGSC0003DMT400008290 | Potato | nucleus | 28.73 | 23.42 |
| CDY32725 | Canola | nucleus | 22.06 | 22.31 |
| Bra020390.1-P | Field mustard | nucleus | 22.06 | 22.31 |
| AT5G58080.1 | Thale cress | nucleus | 22.22 | 22.05 |
| CDY02793 | Canola | nucleus | 21.9 | 22.04 |
| TraesCS3B01G394200.1 | Wheat | nucleus, plastid | 7.62 | 21.33 |
| TraesCS4B01G240100.1 | Wheat | nucleus | 22.06 | 20.32 |
| TraesCS3B01G594300.1 | Wheat | nucleus | 7.3 | 16.03 |
| TraesCS1B01G268900.1 | Wheat | nucleus | 7.78 | 15.91 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | InterPro:CheY-like_superfamily | GO:GO:0000160 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:Myb_dom_plants | PFAM:PF00072 |
| PFAM:PF00249 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF7 | InterPro:SANT/Myb | SMART:SM00448 |
| SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 | EnsemblPlantsGene:TraesCS7B01G408700 | EnsemblPlants:TraesCS7B01G408700.1 |
| TIGR:cd00156 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:677961378..677965984
Molecular Weight (calculated)
69526.2 Da
IEP (calculated)
5.819
GRAVY (calculated)
-0.536
Length
630 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGMGGQQRQ MMEDAAEDKF PERLRVLAVD DDRVCLKVLE ALLRRCKYSP TTVMDAKTAL KMLRSGKEEF DMVITDVRML DMDGFKLLEL IGLEMDLPVI
101: MLSVDCDKKA VMKGINHGAC DYLMKPVQTN ELKNIWQHVE SRRRSQSISH MSRDNDDDQR VHTGTLAKSK DSKSKSNDED DSNENKESTH ASTTQKKMRV
201: AWTTELHNKF LEAIYQIGLE KAAPNKILEL MNVDYLTRHN IASHLQKYRL YLNRVKSNPL GDARERQNSS MGNQRNFMHN HEHGRWHVSS CDNPSWSPNY
301: FGATSQLGQP TDNQSNLCMG SLIHGGRMSR YLVPNTPDAR RFADPEDPPI SLYNGILDDI MLDEFSSYSS GTSYVDSMRG KLMETSKGKT PSNLRSHLTN
401: TSGGGGSSAP TNEYQVNLTG ILHRGGTSHV PPRVNIPTIN QLTSYETPSS GMLMQNQLPA FIGNTISVGG FNEQIVPFNI PTNPSSIGIL NAHNTTPVAP
501: SQMVGSITTL RSGFNEKISP FNIANNTSSV GTMLNGNSAL GVGSTSKSEI NMVNCGRTIS TLSNLQTDGF VELTPMPDGG DVVGILHVQE SMVNQQEPND
601: LLNDINDLSS DDIANLLNDD SIGEDAIMDG
101: MLSVDCDKKA VMKGINHGAC DYLMKPVQTN ELKNIWQHVE SRRRSQSISH MSRDNDDDQR VHTGTLAKSK DSKSKSNDED DSNENKESTH ASTTQKKMRV
201: AWTTELHNKF LEAIYQIGLE KAAPNKILEL MNVDYLTRHN IASHLQKYRL YLNRVKSNPL GDARERQNSS MGNQRNFMHN HEHGRWHVSS CDNPSWSPNY
301: FGATSQLGQP TDNQSNLCMG SLIHGGRMSR YLVPNTPDAR RFADPEDPPI SLYNGILDDI MLDEFSSYSS GTSYVDSMRG KLMETSKGKT PSNLRSHLTN
401: TSGGGGSSAP TNEYQVNLTG ILHRGGTSHV PPRVNIPTIN QLTSYETPSS GMLMQNQLPA FIGNTISVGG FNEQIVPFNI PTNPSSIGIL NAHNTTPVAP
501: SQMVGSITTL RSGFNEKISP FNIANNTSSV GTMLNGNSAL GVGSTSKSEI NMVNCGRTIS TLSNLQTDGF VELTPMPDGG DVVGILHVQE SMVNQQEPND
601: LLNDINDLSS DDIANLLNDD SIGEDAIMDG
001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI
Arabidopsis Description
ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.